SCOPe 2.06: Domain d2hama_: 2ham A:

Lineage for d2hama_ (2ham A:)

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)

6. Protein automated matches [190059] (14 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187214] (173 PDB entries)

8. Domain d2hama_: 2ham A: [136290]
   automated match to d1ie9a_
   complexed with c33

Details for d2hama_

PDB Entry: 2ham, 1.9 Å

PDB Description: crystal structure of vdr lbd complexed to 2alpha-propyl-calcitriol

PDB Compounds: (A:) Vitamin D3 receptor

SCOPe Domain Sequences for d2hama_:

Sequence, based on SEQRES records:

>d2hama_ a.123.1.1 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
slrpklseeqqriiailldahhktydptysdfcqfrppvrvndgggsvtlelsqlsmlph
ladlvsysiqkvigfakmipgfrdltsedqivllkssaievimlrsnesftmddmswtcg
nqdykyrvsdvtkaghslelieplikfqvglkklnlheeehvllmaicivspdrpgvqda
alieaiqdrlsntlqtyircrhpppgshllyakmiqkladlrslneehskqyrclsfqpe
csmkltplvlevfg

Sequence, based on observed residues (ATOM records):

>d2hama_ a.123.1.1 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
slrpklseeqqriiailldahhktydptysdfcqfrppvrvndgggsvtlelsqlsmlph
ladlvsysiqkvigfakmipgfrdltsedqivllkssaievimlrsnesftmddmswtcg
nqdykyrvsdvtkaghslelieplikfqvglkklnlheeehvllmaicivspdrpgvqda
alieaiqdrlsntlqtyircrhppgshllyakmiqkladlrslneehskqyrclsfqpec
smkltplvlevfg

Timeline for d2hama_:

• d2hama_ first appeared in SCOP 1.73, called d2hama1
  
• d2hama_ appears in SCOPe 2.05
  
• d2hama_ appears in SCOPe 2.07
  
• d2hama_ appears in the current release, SCOPe 2.08