Lineage for d2hama1 (2ham A:119-423)

  1. Root: SCOP 1.73
  2. 631650Class a: All alpha proteins [46456] (258 folds)
  3. 647844Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
    multihelical; 3 layers or orthogonally packed helices
  4. 647845Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (1 family) (S)
  5. 647846Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (32 proteins)
  6. 648282Protein Vitamin D nuclear receptor [48528] (2 species)
  7. 648283Species Human (Homo sapiens) [TaxId:9606] [48529] (11 PDB entries)
  8. 648289Domain d2hama1: 2ham A:119-423 [136290]
    automatically matched to d1ie9a_
    complexed with c33

Details for d2hama1

PDB Entry: 2ham (more details), 1.9 Å

PDB Description: crystal structure of vdr lbd complexed to 2alpha-propyl-calcitriol
PDB Compounds: (A:) Vitamin D3 receptor

SCOP Domain Sequences for d2hama1:

Sequence, based on SEQRES records: (download)

>d2hama1 a.123.1.1 (A:119-423) Vitamin D nuclear receptor {Human (Homo sapiens) [TaxId: 9606]}
slrpklseeqqriiailldahhktydptysdfcqfrppvrvndgggsvtlelsqlsmlph
ladlvsysiqkvigfakmipgfrdltsedqivllkssaievimlrsnesftmddmswtcg
nqdykyrvsdvtkaghslelieplikfqvglkklnlheeehvllmaicivspdrpgvqda
alieaiqdrlsntlqtyircrhpppgshllyakmiqkladlrslneehskqyrclsfqpe
csmkltplvlevfg

Sequence, based on observed residues (ATOM records): (download)

>d2hama1 a.123.1.1 (A:119-423) Vitamin D nuclear receptor {Human (Homo sapiens) [TaxId: 9606]}
slrpklseeqqriiailldahhktydptysdfcqfrppvrvndgggsvtlelsqlsmlph
ladlvsysiqkvigfakmipgfrdltsedqivllkssaievimlrsnesftmddmswtcg
nqdykyrvsdvtkaghslelieplikfqvglkklnlheeehvllmaicivspdrpgvqda
alieaiqdrlsntlqtyircrhppgshllyakmiqkladlrslneehskqyrclsfqpec
smkltplvlevfg

SCOP Domain Coordinates for d2hama1:

Click to download the PDB-style file with coordinates for d2hama1.
(The format of our PDB-style files is described here.)

Timeline for d2hama1: