Lineage for d2gyyd1 (2gyy D:3-127,D:330-350)

  1. Root: SCOP 1.75
  2. 814173Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 819418Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 819419Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (12 families) (S)
  5. 820760Family c.2.1.3: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain [51800] (22 proteins)
    family members also share a common alpha+beta fold in C-terminal domain
  6. 820803Protein Aspartate beta-semialdehyde dehydrogenase [51813] (4 species)
  7. 820834Species Streptococcus pneumoniae [TaxId:1313] [141917] (4 PDB entries)
    Uniprot Q8DQ00 2-127,330-357
  8. 820840Domain d2gyyd1: 2gyy D:3-127,D:330-350 [135885]
    Other proteins in same PDB: d2gyya2, d2gyyb2, d2gyyc2, d2gyyd2
    automatically matched to 2GYY A:2-127,A:330-357

Details for d2gyyd1

PDB Entry: 2gyy (more details), 2.1 Å

PDB Description: Structure of aspartate semialdehyde dehydrogenase (ASADH) from Streptococcus pneumoniae
PDB Compounds: (D:) Aspartate beta-semialdehyde dehydrogenase

SCOP Domain Sequences for d2gyyd1:

Sequence, based on SEQRES records: (download)

>d2gyyd1 c.2.1.3 (D:3-127,D:330-350) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}
ytvavvgatgavgaqmikmleestlpidkirylasarsagkslkfkdqditieettetaf
egvdialfsagsstsakyapyavkagvvvvdntsyfrqnpdvplvvpevnahaldahngi
iacpnXaawnsvqiaetlherglvrpt

Sequence, based on observed residues (ATOM records): (download)

>d2gyyd1 c.2.1.3 (D:3-127,D:330-350) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}
ytvavvgatgavgaqmikmleestlpidkirylgkslkfkdqditieettetafegvdia
lfsagsstsakyapyavkagvvvvdntsyfrqnpdvplvvpevnahaldahngiiacpnX
aawnsvqiaetlherglvrpt

SCOP Domain Coordinates for d2gyyd1:

Click to download the PDB-style file with coordinates for d2gyyd1.
(The format of our PDB-style files is described here.)

Timeline for d2gyyd1: