SCOPe 2.07: Domain d2gykf_: 2gyk F:

Lineage for d2gykf_ (2gyk F:)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.4: His-Me finger endonucleases [54059] (1 superfamily)
   core: (alpha)-beta-omega_loop-beta-alpha; embeded in larger different structures

4. Superfamily d.4.1: His-Me finger endonucleases [54060] (8 families)
   common motif contains conserved histidine residue and metal-binding site

5. Family d.4.1.1: HNH-motif [54061] (3 proteins)

6. Protein DNase domain of colicin E9 [54064] (1 species)

7. Species Escherichia coli [TaxId:562] [54065] (15 PDB entries)
   Uniprot P09883 456-581

8. Domain d2gykf_: 2gyk F: [135858]
   Other proteins in same PDB: d2gyka1, d2gyke_
   automated match to d1fsjb_
   protein/DNA complex; complexed with po4, zn; mutant

Details for d2gykf_

PDB Entry: 2gyk, 1.6 Å

PDB Description: crystal structure of the complex of the colicin e9 dnase domain with a mutant immunity protein, imme9 (d51a)

PDB Compounds: (F:) colicin-e9

SCOPe Domain Sequences for d2gykf_:

Sequence; same for both SEQRES and ATOM records:

>d2gykf_ d.4.1.1 (F:) DNase domain of colicin E9 {Escherichia coli [TaxId: 562]}
eskrnkpgkatgkgkpvgdkwlddagkdsgapipdriadklrdkefksfddfrkavweev
skdpelsknlnpsnkssvskgyspftpknqqvggrkvyelhhdkpisqggevydmdnirv
ttpkrhidihrg

Timeline for d2gykf_:

• d2gykf_ first appeared in SCOP 1.73, called d2gykf1
  
• d2gykf_ appears in SCOPe 2.06
  
• d2gykf_ appears in the current release, SCOPe 2.08