Lineage for d2gyda_ (2gyd A:)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1988413Fold a.25: Ferritin-like [47239] (6 superfamilies)
    core: 4 helices; bundle, closed, left-handed twist; 1 crossover connection
  4. 1988414Superfamily a.25.1: Ferritin-like [47240] (10 families) (S)
    contains bimetal-ion centre in the middle of the bundle
  5. 1988415Family a.25.1.1: Ferritin [47241] (10 protein domains)
  6. 1988416Protein (Apo)ferritin [47246] (8 species)
  7. 1988470Species Horse (Equus caballus), L chain [TaxId:9796] [47248] (65 PDB entries)
  8. 1988493Domain d2gyda_: 2gyd A: [135856]
    automated match to d1gwga_
    complexed with cd, dfe

Details for d2gyda_

PDB Entry: 2gyd (more details), 1.72 Å

PDB Description: Complex of equine apoferritin with the H-diaziflurane photolabeling reagent
PDB Compounds: (A:) ferritin L subunit

SCOPe Domain Sequences for d2gyda_:

Sequence, based on SEQRES records: (download)

>d2gyda_ a.25.1.1 (A:) (Apo)ferritin {Horse (Equus caballus), L chain [TaxId: 9796]}
sqirqnysteveaavnrlvnlylrasytylslgfyfdrddvalegvchffrelaeekreg
aerllkmqnqrggralfqdlqkpsqdewgttldamkaaivlekslnqalldlhalgsaqa
dphlcdfleshfldeevklikkmgdhltniqrlvgsqaglgeylferltl

Sequence, based on observed residues (ATOM records): (download)

>d2gyda_ a.25.1.1 (A:) (Apo)ferritin {Horse (Equus caballus), L chain [TaxId: 9796]}
sqirqnysteveaavnrlvnlylrasytylslgfyfdrddvalegvchffrelaeekreg
aerllkmqnqrggralfqdlqkpsqdewgttldamkaaivlekslnqalldlhalgsaqa
dphlcdfleshfldeevklikkmgdhltniqrlvqaglgeylferltl

SCOPe Domain Coordinates for d2gyda_:

Click to download the PDB-style file with coordinates for d2gyda_.
(The format of our PDB-style files is described here.)

Timeline for d2gyda_: