SCOP 1.73: Domain d2gvdb1: 2gvd B:879-1076

Lineage for d2gvdb1 (2gvd B:879-1076)

1. Root: SCOP 1.73

2. Class d: Alpha and beta proteins (a+b) [53931] (334 folds)

3. Fold d.58: Ferredoxin-like [54861] (55 superfamilies)
   alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2

4. Superfamily d.58.29: Nucleotide cyclase [55073] (2 families)
   common fold is elaborated with additional secondary structures

5. Family d.58.29.1: Adenylyl and guanylyl cyclase catalytic domain [55074] (5 proteins)
   Pfam PF00211
   structurally similar to the "palm" domain of DNA/RNA polymerase superfamily

6. Protein Type II adenylyl cyclase C2 domain [55075] (1 species)

7. Species Rat (Rattus norvegicus) [TaxId:10116] [55076] (5 PDB entries)

8. Domain d2gvdb1: 2gvd B:879-1076 [135772]
   Other proteins in same PDB: d2gvda1, d2gvdc1, d2gvdc2
   automatically matched to d1ab8b_
   complexed with 128, cl, fkp, gsp, mn

Details for d2gvdb1

PDB Entry: 2gvd, 2.9 Å

PDB Description: complex of gs- with the catalytic domains of mammalian adenylyl cyclase: complex with tnp-atp and mn

PDB Compounds: (B:) Adenylate cyclase type 2

SCOP Domain Sequences for d2gvdb1:

Sequence, based on SEQRES records:

>d2gvdb1 d.58.29.1 (B:879-1076) Type II adenylyl cyclase C2 domain {Rat (Rattus norvegicus) [TaxId: 10116]}
hqsydcvcvmfasipdfkefytesdvnkegleclrllneiiadfddllskpkfsgvekik
tigstymaatglsaipsqehaqeperqymhigtmvefayalvgkldainkhsfndfklrv
ginhgpviagvigaqkpqydiwgntvnvasrmdstgvldkiqvteetslilqtlgytctc
rgiinvkgkgdlktyfvn

Sequence, based on observed residues (ATOM records):

>d2gvdb1 d.58.29.1 (B:879-1076) Type II adenylyl cyclase C2 domain {Rat (Rattus norvegicus) [TaxId: 10116]}
hqsydcvcvmfasipdfkefytesdvnkegleclrllneiiadfddllskpkfsgvekik
tigstymaatglsairqymhigtmvefayalvgkldainkhsfndfklrvginhgpviag
vigaqkpqydiwgntvnvasrmdstgvldkiqvteetslilqtlgytctcrgiinvkgkg
dlktyfvn

Timeline for d2gvdb1:

• d2gvdb1 is new in SCOP 1.73
  
• d2gvdb1 appears in SCOP 1.75
  
• d2gvdb1 appears in the current release, SCOPe 2.08, called d2gvdb_