Class d: Alpha and beta proteins (a+b) [53931] (334 folds) |
Fold d.153: Ntn hydrolase-like [56234] (2 superfamilies) 4 layers: alpha/beta/beta/alpha; has an unusual sheet-to-sheet packing |
Superfamily d.153.1: N-terminal nucleophile aminohydrolases (Ntn hydrolases) [56235] (6 families) N-terminal residue provides two catalytic groups, nucleophile and proton donor |
Family d.153.1.4: Proteasome subunits [56251] (3 proteins) |
Protein Proteasome alpha subunit (non-catalytic) [56255] (5 species) contains an extension to the common fold at the N-terminus |
Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [56257] (9 PDB entries) The structure of yeast proteasome complexed with the proteasome activator pa26 is available from PDB (1fnt). The 1FNT entry designates protein chains by both upper case and lower case letters creating problems with its processing and presentation in SCOP; the proteasome activator pa26 structure is classified elsewhere in SCOP (a.24.8) |
Domain d2gplf1: 2gpl F:5-241 [135463] Other proteins in same PDB: d2gpl11, d2gpl21, d2gplh1, d2gpli1, d2gplj1, d2gplk1, d2gpll1, d2gplm1, d2gpln1, d2gplv1, d2gplw1, d2gplx1, d2gply1, d2gplz1 automatically matched to d1g65f_ complexed with biq |
PDB Entry: 2gpl (more details), 2.81 Å
SCOP Domain Sequences for d2gplf1:
Sequence; same for both SEQRES and ATOM records: (download)
>d2gplf1 d.153.1.4 (F:5-241) Proteasome alpha subunit (non-catalytic) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} gtgydlsnsvfspdgrnfqveyavkavengttsigikcndgvvfaveklitskllvpqkn vkiqvvdrhigcvysglipdgrhlvnrgreeaasfkklyktpipipafadrlgqyvqaht lynsvrpfgvstifggvdkngahlymlepsgsywgykgaatgkgrqsakaeleklvdhhp eglsareavkqaakiiylahednkekdfeleiswcslsetnglhkfvkgdllqeaidfaq kein
Timeline for d2gplf1:
View in 3D Domains from other chains: (mouse over for more information) d2gpl11, d2gpl21, d2gpla1, d2gplb1, d2gplc1, d2gpld1, d2gple1, d2gplg1, d2gplh1, d2gpli1, d2gplj1, d2gplk1, d2gpll1, d2gplm1, d2gpln1, d2gplo1, d2gplp1, d2gplq1, d2gplr1, d2gpls1, d2gplt1, d2gplu1, d2gplv1, d2gplw1, d2gplx1, d2gply1, d2gplz1 |