Lineage for d2gmpb1 (2gmp B:1-240)

  1. Root: SCOP 1.75
  2. 781541Class b: All beta proteins [48724] (174 folds)
  3. 794080Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
    sandwich; 12-14 strands in 2 sheets; complex topology
  4. 794081Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (25 families) (S)
  5. 794082Family b.29.1.1: Legume lectins [49900] (4 proteins)
  6. 794214Protein Legume lectin [49904] (23 species)
  7. 794218Species Bloodwood tree (Pterocarpus angolensis) [TaxId:182271] [82032] (30 PDB entries)
  8. 794276Domain d2gmpb1: 2gmp B:1-240 [135392]
    automatically matched to d1q8oa_
    complexed with man, nag, so4

Details for d2gmpb1

PDB Entry: 2gmp (more details), 2.5 Å

PDB Description: metal-free (apo) p. angolensis seed lectin in complex with glcnac- beta(1-2)man
PDB Compounds: (B:) lectin

SCOP Domain Sequences for d2gmpb1:

Sequence, based on SEQRES records: (download)

>d2gmpb1 b.29.1.1 (B:1-240) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]}
edslsfgfptfpsdqknlifqgdaqiknnavqltktdsngnpvastvgrilfsaqvhlwe
ksssrvanfqsqfsfslksplsngadgiaffiappdttipsgsgggllglfapgtaqnts
anqviavefdtfyaqdsntwdpnyphigidvnsirsvktvkwdrrdgqslnvlvtfnpst
rnldvvatysdgtryevsyevdvrsvlpewvrvgfsaasgeqyqthtleswsftstllyt

Sequence, based on observed residues (ATOM records): (download)

>d2gmpb1 b.29.1.1 (B:1-240) Legume lectin {Bloodwood tree (Pterocarpus angolensis) [TaxId: 182271]}
edslsfgfptfpsdqknlifqgdaqiknnavqltktdsngnpvastvgrilfsaqvhlwe
ksssrvanfqsqfsfslksplsngadgiaffiappdttipsgsgggllglfapgnqviav
efdtfyaqdsntwdpnyphigidvnsirsvktvkwdrrdgqslnvlvtfnpstrnldvva
tysdgtryevsyevdvrsvlpewvrvgfsaasgeqyqthtleswsftstllyt

SCOP Domain Coordinates for d2gmpb1:

Click to download the PDB-style file with coordinates for d2gmpb1.
(The format of our PDB-style files is described here.)

Timeline for d2gmpb1: