SCOPe 2.08: Domain d2gm4a2: 2gm4 A:1-140

Lineage for d2gm4a2 (2gm4 A:1-140)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.53: Resolvase-like [53040] (2 superfamilies)
   Core: 3 layers: a/b/a; mixed beta-sheet of 5 strands, order 21345; strand 5 is antiparallel to the rest

4. Superfamily c.53.1: Resolvase-like [53041] (2 families)
   automatically mapped to Pfam PF00239

5. Family c.53.1.1: gamma,delta resolvase, catalytic domain [53042] (1 protein)

6. Protein gamma,delta resolvase, catalytic domain [53043] (1 species)

7. Species Escherichia coli [TaxId:562] [53044] (9 PDB entries)

8. Domain d2gm4a2: 2gm4 A:1-140 [135361]
   Other proteins in same PDB: d2gm4a1, d2gm4b1
   automatically matched to d1gdta2
   protein/DNA complex

Details for d2gm4a2

PDB Entry: 2gm4, 3.5 Å

PDB Description: an activated, tetrameric gamma-delta resolvase: hin chimaera bound to cleaved dna

PDB Compounds: (A:) transposon gamma-delta resolvase

SCOPe Domain Sequences for d2gm4a2:

Sequence, based on SEQRES records:

>d2gm4a2 c.53.1.1 (A:1-140) gamma,delta resolvase, catalytic domain {Escherichia coli [TaxId: 562]}
malfgyarvstsqqsldiqvralkdagvkanriftdkasgsssdrkgldllrmkvkegdv
ilvkkldrlgrdtadmiqlikefdaqgvsirfiddsidtssamgrmvvtilsavaqaerq
rilqrtnegrqeamakgvvf

Sequence, based on observed residues (ATOM records):

>d2gm4a2 c.53.1.1 (A:1-140) gamma,delta resolvase, catalytic domain {Escherichia coli [TaxId: 562]}
malfgyarvstsqqsldiqvralkdagvkanriftdkasdrkgldllrmkvkegdvilvk
kldrlgrdtadmiqlikefdaqgvsirfiddsidtssamgrmvvtilsavaqaerqrilq
rtnegrqeamakgvvf

Timeline for d2gm4a2:

• d2gm4a2 first appeared in SCOP 1.73
  
• d2gm4a2 appears in SCOPe 2.07