Lineage for d2gjra2 (2gjr A:5-398)

  1. Root: SCOP 1.73
  2. 681097Class c: Alpha and beta proteins (a/b) [51349] (141 folds)
  3. 681098Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 682152Superfamily c.1.8: (Trans)glycosidases [51445] (14 families) (S)
  5. 682153Family c.1.8.1: Amylase, catalytic domain [51446] (24 proteins)
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. 682255Protein Bacterial alpha-amylase [51447] (10 species)
  7. 682260Species Bacillus halmapalus [TaxId:79882] [141768] (3 PDB entries)
  8. 682263Domain d2gjra2: 2gjr A:5-398 [135286]
    Other proteins in same PDB: d2gjra1
    automatically matched to 1W9X A:5-398
    complexed with act, ca, na

Details for d2gjra2

PDB Entry: 2gjr (more details), 2.1 Å

PDB Description: structure of bacillus halmapalus alpha-amylase without any substrate analogues
PDB Compounds: (A:) alpha-amylase

SCOP Domain Sequences for d2gjra2:

Sequence; same for both SEQRES and ATOM records: (download)

>d2gjra2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus halmapalus [TaxId: 79882]}
tngtmmqyfewhlpndgqhwnrlrddasnlrnrgitaiwippawkgtsqndvgygaydly
dlgefnqkgtvrtkygtrsqlesaihalknngvqvygdvvmnhkggadatenvlavevnp
nnrnqeisgdytieawtkfdfpgrgntysdfkwrwyhfdgvdwdqsrqfqnriykfrgdg
kawdwevdsengnydylmyadvdmdhpevvnelrrwgewytntlnldgfridavkhikys
ftrdwlthvrnatgkemfavaefwkndlgalenylnktnwnhsvfdvplhynlynasnsg
gnydmakllngtvvqkhpmhavtfvdnhdsqpgeslesfvqewfkplayaliltreqgyp
svfygdyygipthsvpamkakidpilearqnfay

SCOP Domain Coordinates for d2gjra2:

Click to download the PDB-style file with coordinates for d2gjra2.
(The format of our PDB-style files is described here.)

Timeline for d2gjra2:

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Domains from same chain:
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d2gjra1