SCOP 1.73: Domain d2gjpa2: 2gjp A:5-398

Lineage for d2gjpa2 (2gjp A:5-398)

1. Root: SCOP 1.73

2. Class c: Alpha and beta proteins (a/b) [51349] (141 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (14 families)

5. Family c.1.8.1: Amylase, catalytic domain [51446] (24 proteins)
   members of the family may contain various insert subdomains
   in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain

6. Protein Bacterial alpha-amylase [51447] (10 species)

7. Species Bacillus halmapalus [TaxId:79882] [141768] (3 PDB entries)

8. Domain d2gjpa2: 2gjp A:5-398 [135284]
   Other proteins in same PDB: d2gjpa1
   automatically matched to 1W9X A:5-398
   complexed with bgc, ca, daf, glc, mal, na

Details for d2gjpa2

PDB Entry: 2gjp, 1.9 Å

PDB Description: structure of bacillus halmapalus alpha-amylase, crystallized with the substrate analogue acarbose and maltose

PDB Compounds: (A:) alpha-amylase

SCOP Domain Sequences for d2gjpa2:

Sequence; same for both SEQRES and ATOM records:

>d2gjpa2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus halmapalus [TaxId: 79882]}
tngtmmqyfewhlpndgqhwnrlrddasnlrnrgitaiwippawkgtsqndvgygaydly
dlgefnqkgtvrtkygtrsqlesaihalknngvqvygdvvmnhkggadatenvlavevnp
nnrnqeisgdytieawtkfdfpgrgntysdfkwrwyhfdgvdwdqsrqfqnriykfrgdg
kawdwevdsengnydylmyadvdmdhpevvnelrrwgewytntlnldgfridavkhikys
ftrdwlthvrnatgkemfavaefwkndlgalenylnktnwnhsvfdvplhynlynasnsg
gnydmakllngtvvqkhpmhavtfvdnhdsqpgeslesfvqewfkplayaliltreqgyp
svfygdyygipthsvpamkakidpilearqnfay

Timeline for d2gjpa2:

• d2gjpa2 is new in SCOP 1.73
  
• d2gjpa2 appears in SCOP 1.75
  
• d2gjpa2 appears in the current release, SCOPe 2.08