SCOP 1.75: Domain d2gicc1: 2gic C:2-422

Lineage for d2gicc1 (2gic C:2-422)

1. Root: SCOP 1.75

2. Class a: All alpha proteins [46456] (284 folds)

3. Fold a.260: Rhabdovirus nucleoprotein-like [140808] (1 superfamily)
   multihelical, consist of two helical domains; each domain contains a buried helix

4. Superfamily a.260.1: Rhabdovirus nucleoprotein-like [140809] (1 family)

5. Family a.260.1.1: Rhabdovirus nucleocapsid protein [140810] (1 protein)
   Pfam PF00945; RNA-binding homooligomeric protein

6. Protein Nucleoprotein [140811] (2 species)

7. Species Vesicular stomatitis indiana virus [TaxId:11277] [140813] (1 PDB entry)
   Uniprot P03521 2-422

8. Domain d2gicc1: 2gic C:2-422 [135229]
   automatically matched to 2GIC A:2-422
   complexed with ium

Details for d2gicc1

PDB Entry: 2gic, 2.92 Å

PDB Description: crystal structure of a vesicular stomatitis virus nucleocapsid-rna complex

PDB Compounds: (C:) nucleocapsid protein

SCOP Domain Sequences for d2gicc1:

Sequence, based on SEQRES records:

>d2gicc1 a.260.1.1 (C:2-422) Nucleoprotein {Vesicular stomatitis indiana virus [TaxId: 11277]}
svtvkriidntvivpklpanedpveypadyfrkskeiplyinttkslsdlrgyvyqglks
gnvsiihvnsylygalkdirgkldkdwssfginigkagdtigifdlvslkaldgvlpdgv
sdasrtsaddkwlplyllglyrvgrtqmpeyrkklmdgltnqckmineqfeplvpegrdi
fdvwgndsnytkivaavdmffhmfkkhecasfrygtivsrfkdcaalatfghlckitgms
tedvttwilnrevademvqmmlpgqeidkadsympylidfglsskspyssvknpafhfwg
qltalllrstrarnarqpddieytslttagllyayavgssadlaqqfcvgdnkytpddst
gglttnappqgrdvvewlgwfedqnrkptpdmmqyakravmslqglrektigkyaksefd
k

Sequence, based on observed residues (ATOM records):

>d2gicc1 a.260.1.1 (C:2-422) Nucleoprotein {Vesicular stomatitis indiana virus [TaxId: 11277]}
svtvkriidntvivpklpanedpveypadyfrkskeiplyinttkslsdlrgyvyqglks
gnvsiihvnsylygalkdirgkldkdwssfginigkagdtigifdlvslkaldgvlpdgv
sdasrtsaddkwlplyllglyrvgrtqmpeyrkklmdgltnqckmineqfeplvpegrdi
fdvwgndsnytkivaavdmffhmfkkhecasfrygtivsrfkdcaalatfghlckitgms
tedvttwilnrevademvqmmlpgqeidkadsympylidfglsskspyssvknpafhfwg
qltalllrstrarnarqpddieytslttagllyayavgssadlaqqfcvgdnkytptnap
pqgrdvvewlgwfedqnrkptpdmmqyakravmslqglrektigkyaksefdk

Timeline for d2gicc1:

• d2gicc1 first appeared in SCOP 1.73
  
• d2gicc1 is called d2gicc_ in SCOPe 2.01
  
• d2gicc1 appears in the current release, SCOPe 2.08, called d2gicc_