SCOPe 2.08: Domain d2gibb_: 2gib B:

Lineage for d2gibb_ (2gib B:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.254: Nucleocapsid protein dimerization domain [103067] (1 superfamily)
   dimer of alpha-beta(2)-alpha motifs ; 2 layers, alpha/beta

4. Superfamily d.254.1: Nucleocapsid protein dimerization domain [103068] (3 families)

5. Family d.254.1.2: Coronavirus nucleocapsid protein [143508] (2 proteins)
   C-terminal part of Pfam PF00937

6. Protein Coronavirus nucleocapsid protein [143509] (2 species)

7. Species SARS coronavirus [TaxId:227859] [143511] (2 PDB entries)
   Uniprot P59595 270-366

8. Domain d2gibb_: 2gib B: [135226]
   automated match to d2giba1
   complexed with so4

Details for d2gibb_

PDB Entry: 2gib, 1.75 Å

PDB Description: Crystal structure of the SARS coronavirus nucleocapsid protein dimerization domain

PDB Compounds: (B:) nucleocapsid protein

SCOPe Domain Sequences for d2gibb_:

Sequence; same for both SEQRES and ATOM records:

>d2gibb_ d.254.1.2 (B:) Coronavirus nucleocapsid protein {SARS coronavirus [TaxId: 227859]}
afgrrgpeqtqgnfgdqdlirqgtdykhwpqiaqfapsasaffgmsrigmevtpsgtwlt
yhgaiklddkdpqfkdnvillnkhidayktfpptep

Timeline for d2gibb_:

• d2gibb_ first appeared in SCOP 1.73, called d2gibb1
  
• d2gibb_ appears in SCOPe 2.07