SCOPe 2.07: Domain d2ge8d_: 2ge8 D:

Lineage for d2ge8d_ (2ge8 D:)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.254: Nucleocapsid protein dimerization domain [103067] (1 superfamily)
   dimer of alpha-beta(2)-alpha motifs ; 2 layers, alpha/beta

4. Superfamily d.254.1: Nucleocapsid protein dimerization domain [103068] (3 families)

5. Family d.254.1.2: Coronavirus nucleocapsid protein [143508] (2 proteins)
   C-terminal part of Pfam PF00937

6. Protein Coronavirus nucleocapsid protein [143509] (2 species)

7. Species Avian infectious bronchitis virus [TaxId:11120] [143510] (3 PDB entries)
   Uniprot P32923 222-333! Uniprot P32923 226-332! Uniprot Q4ZJS4 218-326
   different strains

8. Domain d2ge8d_: 2ge8 D: [135054]
   automated match to d2ge8a1
   protein/RNA complex

Details for d2ge8d_

PDB Entry: 2ge8, 2.2 Å

PDB Description: Structure of the C-terminal dimerization domain of infectious bronchitis virus nucleocapsid protein

PDB Compounds: (D:) nucleocapsid protein

SCOPe Domain Sequences for d2ge8d_:

Sequence; same for both SEQRES and ATOM records:

>d2ge8d_ d.254.1.2 (D:) Coronavirus nucleocapsid protein {Avian infectious bronchitis virus [TaxId: 11120]}
ahrryckrtippgykvdqvfgprtkgkegnfgddkmneegikdgrvtamlnlvpsshacl
fgsrvtpklqpdglhlkfefttvvprddpqfdnyvkicdqcvdgvgtrpkd

Timeline for d2ge8d_:

• d2ge8d_ first appeared in SCOP 1.73, called d2ge8d1
  
• d2ge8d_ appears in SCOPe 2.06
  
• d2ge8d_ appears in the current release, SCOPe 2.08