Lineage for d2gdva2 (2gdv A:1-434)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2081496Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2081497Family c.1.8.1: Amylase, catalytic domain [51446] (26 protein domains)
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. 2081983Protein Sucrose phosphorylase [102060] (1 species)
    sequence and close structural relationship to amylosucrase; variations in the C-terminal domain fold
  7. 2081984Species Bifidobacterium adolescentis [TaxId:1680] [102061] (2 PDB entries)
  8. 2081987Domain d2gdva2: 2gdv A:1-434 [135037]
    Other proteins in same PDB: d2gdva1, d2gdvb1
    automated match to d1r7aa2
    complexed with bgc

Details for d2gdva2

PDB Entry: 2gdv (more details), 2 Å

PDB Description: sucrose phosphorylase from bifidobacterium adolescentis reacted with sucrose
PDB Compounds: (A:) sucrose phosphorylase

SCOPe Domain Sequences for d2gdva2:

Sequence; same for both SEQRES and ATOM records: (download)

>d2gdva2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]}
mknkvqlityadrlgdgtiksmtdilrtrfdgvydgvhilpfftpfdgadagfdpidhtk
vderlgswddvaelskthnimvdaivnhmsweskqfqdvlakgeeseyypmfltmssvfp
ngateedlagiyrprpglpfthykfagktrlvwvsftpqqvdidtdsdkgweylmsifdq
maashvsyirldavgygakeagtscfmtpktfklisrlreegvkrgleilievhsyykkq
veiaskvdrvydfalpplllhalstghvepvahwtdirpnnavtvldthdgigvidigsd
qldrslkglvpdedvdnlvntihanthgesqaatgaaasnldlyqvnstyysalgcndqh
yiaaravqfflpgvpqvyyvgalagkndmellrktnngrdinrhyystaeidenlkrpvv
kalnalakfrneld

SCOPe Domain Coordinates for d2gdva2:

Click to download the PDB-style file with coordinates for d2gdva2.
(The format of our PDB-style files is described here.)

Timeline for d2gdva2:

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Domains from same chain:
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d2gdva1