SCOP 1.73: Domain d2gd6b1: 2gd6 B:2-360

Lineage for d2gd6b1 (2gd6 B:2-360)

1. Root: SCOP 1.73

2. Class c: Alpha and beta proteins (a/b) [51349] (141 folds)

3. Fold c.123: CoA-transferase family III (CaiB/BaiF) [89795] (1 superfamily)
   consist of two different alpha/beta domains; N-terminal domain has a SurE-like topology with a left-handed beta-alpha-beta unit

4. Superfamily c.123.1: CoA-transferase family III (CaiB/BaiF) [89796] (1 family)

5. Family c.123.1.1: CoA-transferase family III (CaiB/BaiF) [89797] (4 proteins)
   forms interlocked homodimer of two ring-like subunits

6. Protein 2-methylacyl-CoA racemase Mcr [142827] (1 species)

7. Species Mycobacterium tuberculosis [TaxId:1773] [142828] (6 PDB entries)

8. Domain d2gd6b1: 2gd6 B:2-360 [135007]
   automatically matched to 1X74 A:2-360
   complexed with aco, gol

Details for d2gd6b1

PDB Entry: 2gd6, 2.3 Å

PDB Description: the 1,1-proton transfer reaction mechanism by alpha-methylacyl-coa racemase is catalyzed by an aspartate/histidine pair and involves a smooth, methionine-rich surface for binding the fatty acyl moiety

PDB Compounds: (B:) probable alpha-methylacyl-CoA racemase MCR

SCOP Domain Sequences for d2gd6b1:

Sequence, based on SEQRES records:

>d2gd6b1 c.123.1.1 (B:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]}
agplsglrvvelagigpgphaamilgdlgadvvridrpssvdgisrdamlrnrrivtadl
ksdqglelalkliakadvliegyrpgvterlglgpeecakvndrliyarmtgwgqtgprs
qqaghdinyislngilhaigrgderpvpplnlvgdfgggsmfllvgilaalwerqssgkg
qvvdaamvdgssvliqmmwamratgmwtdtrganmldggapyydtyecadgryvavgaie
pqfyaamlaglgldaaelppqndrarwpelrallteafashdrdhwgavfansdacvtpv
lafgevhnephiierntfyeanggwqpmpaprfsrtassqprppaatidieavltdwdg

Sequence, based on observed residues (ATOM records):

>d2gd6b1 c.123.1.1 (B:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]}
agplsglrvvelagigpgphaamilgdlgadvvridrpisrdamlrnrrivtadlksdqg
lelalkliakadvliegyrpgvterlglgpeecakvndrliyarmtgwgqtgprsqqagh
dinyislngilhaigrgderpvpplnlvgdfgggsmfllvgilaalwerqssgkgqvvda
amvdgssvliqmmwamratgmwtdtrganmldggapyydtyecadgryvavgaiepqfya
amlaglgldaaelppqndrarwpelrallteafashdrdhwgavfansdacvtpvlafge
vhnephiierntfyeanggwqpmpaprfsrtassqprppaatidieavltdwdg

Timeline for d2gd6b1:

• d2gd6b1 is new in SCOP 1.73
  
• d2gd6b1 appears in SCOP 1.75
  
• d2gd6b1 appears in the current release, SCOPe 2.08, called d2gd6b_