Lineage for d2gd2b1 (2gd2 B:2-360)

  1. Root: SCOP 1.73
  2. 681097Class c: Alpha and beta proteins (a/b) [51349] (141 folds)
  3. 713098Fold c.123: CoA-transferase family III (CaiB/BaiF) [89795] (1 superfamily)
    consist of two different alpha/beta domains; N-terminal domain has a SurE-like topology with a left-handed beta-alpha-beta unit
  4. 713099Superfamily c.123.1: CoA-transferase family III (CaiB/BaiF) [89796] (1 family) (S)
  5. 713100Family c.123.1.1: CoA-transferase family III (CaiB/BaiF) [89797] (4 proteins)
    forms interlocked homodimer of two ring-like subunits
  6. 713101Protein 2-methylacyl-CoA racemase Mcr [142827] (1 species)
  7. 713102Species Mycobacterium tuberculosis [TaxId:1773] [142828] (6 PDB entries)
  8. 713112Domain d2gd2b1: 2gd2 B:2-360 [135001]
    automatically matched to 1X74 A:2-360
    complexed with caa, gol

Details for d2gd2b1

PDB Entry: 2gd2 (more details), 1.7 Å

PDB Description: the 1,1-proton transfer reaction mechanism by alpha-methylacyl-coa racemase is catalyzed by an aspartate/histidine pair and involves a smooth, methionine-rich surface for binding the fatty acyl moiety
PDB Compounds: (B:) probable alpha-methylacyl-CoA racemase MCR

SCOP Domain Sequences for d2gd2b1:

Sequence, based on SEQRES records: (download)

>d2gd2b1 c.123.1.1 (B:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]}
agplsglrvvelagigpgphaamilgdlgadvvridrpssvdgisrdamlrnrrivtadl
ksdqglelalkliakadvliegyrpgvterlglgpeecakvndrliyarmtgwgqtgprs
qqaghdinyislngilhaigrgderpvpplnlvgdfgggsmfllvgilaalwerqssgkg
qvvdaamvdgssvliqmmwamratgmwtdtrganmldggapyydtyecadgryvavgaie
pqfyaamlaglgldaaelppqndrarwpelrallteafashdrdhwgavfansdacvtpv
lafgevhnephiierntfyeanggwqpmpaprfsrtassqprppaatidieavltdwdg

Sequence, based on observed residues (ATOM records): (download)

>d2gd2b1 c.123.1.1 (B:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]}
agplsglrvvelagigpgphaamilgdlgadvvridrpisrdamlrnrrivtadlksdqg
lelalkliakadvliegyrpgvterlglgpeecakvndrliyarmtgwgqtgprsqqagh
dinyislngilhaigrgderpvpplnlvgdfgggsmfllvgilaalwerqssgkgqvvda
amvdgssvliqmmwamratgmwtdtrganmldggapyydtyecadgryvavgaiepqfya
amlaglgldaaelppqndrarwpelrallteafashdrdhwgavfansdacvtpvlafge
vhnephiierntfyeanggwqpmpaprfsrtassqprppaatidieavltdwdg

SCOP Domain Coordinates for d2gd2b1:

Click to download the PDB-style file with coordinates for d2gd2b1.
(The format of our PDB-style files is described here.)

Timeline for d2gd2b1: