Lineage for d2gd2b_ (2gd2 B:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2922183Fold c.123: CoA-transferase family III (CaiB/BaiF) [89795] (1 superfamily)
    consist of two different alpha/beta domains; N-terminal domain has a SurE-like topology with a left-handed beta-alpha-beta unit
  4. 2922184Superfamily c.123.1: CoA-transferase family III (CaiB/BaiF) [89796] (2 families) (S)
  5. 2922185Family c.123.1.1: CoA-transferase family III (CaiB/BaiF) [89797] (5 proteins)
    forms interlocked homodimer of two ring-like subunits
  6. 2922186Protein 2-methylacyl-CoA racemase Mcr [142827] (1 species)
  7. 2922187Species Mycobacterium tuberculosis [TaxId:1773] [142828] (7 PDB entries)
    Uniprot O06543 2-360
  8. 2922196Domain d2gd2b_: 2gd2 B: [135001]
    automated match to d1x74a1
    complexed with caa, gol

Details for d2gd2b_

PDB Entry: 2gd2 (more details), 1.7 Å

PDB Description: the 1,1-proton transfer reaction mechanism by alpha-methylacyl-coa racemase is catalyzed by an aspartate/histidine pair and involves a smooth, methionine-rich surface for binding the fatty acyl moiety
PDB Compounds: (B:) probable alpha-methylacyl-CoA racemase MCR

SCOPe Domain Sequences for d2gd2b_:

Sequence, based on SEQRES records: (download)

>d2gd2b_ c.123.1.1 (B:) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]}
agplsglrvvelagigpgphaamilgdlgadvvridrpssvdgisrdamlrnrrivtadl
ksdqglelalkliakadvliegyrpgvterlglgpeecakvndrliyarmtgwgqtgprs
qqaghdinyislngilhaigrgderpvpplnlvgdfgggsmfllvgilaalwerqssgkg
qvvdaamvdgssvliqmmwamratgmwtdtrganmldggapyydtyecadgryvavgaie
pqfyaamlaglgldaaelppqndrarwpelrallteafashdrdhwgavfansdacvtpv
lafgevhnephiierntfyeanggwqpmpaprfsrtassqprppaatidieavltdwdg

Sequence, based on observed residues (ATOM records): (download)

>d2gd2b_ c.123.1.1 (B:) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]}
agplsglrvvelagigpgphaamilgdlgadvvridrpisrdamlrnrrivtadlksdqg
lelalkliakadvliegyrpgvterlglgpeecakvndrliyarmtgwgqtgprsqqagh
dinyislngilhaigrgderpvpplnlvgdfgggsmfllvgilaalwerqssgkgqvvda
amvdgssvliqmmwamratgmwtdtrganmldggapyydtyecadgryvavgaiepqfya
amlaglgldaaelppqndrarwpelrallteafashdrdhwgavfansdacvtpvlafge
vhnephiierntfyeanggwqpmpaprfsrtassqprppaatidieavltdwdg

SCOPe Domain Coordinates for d2gd2b_:

Click to download the PDB-style file with coordinates for d2gd2b_.
(The format of our PDB-style files is described here.)

Timeline for d2gd2b_: