SCOP 1.75: Domain d2g9va1: 2g9v A:13-836

Lineage for d2g9va1 (2g9v A:13-836)

1. Root: SCOP 1.75

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.87: UDP-Glycosyltransferase/glycogen phosphorylase [53755] (1 superfamily)
   consists of two non-similar domains with 3 layers (a/b/a) each
   domain 1: parallel beta-sheet of 7 strands, order 3214567
   domain 2: parallel beta-sheet of 6 strands, order 321456

4. Superfamily c.87.1: UDP-Glycosyltransferase/glycogen phosphorylase [53756] (11 families)

5. Family c.87.1.4: Oligosaccharide phosphorylase [53766] (2 proteins)

6. Protein Glycogen phosphorylase [53767] (3 species)
   both domains are elaborated with many insertions

7. Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [53769] (103 PDB entries)
   Uniprot P00489
   Uniprot P00489
   Uniprot P00489 ! Uniprot P00489

8. Domain d2g9va1: 2g9v A:13-836 [134843]
   automatically matched to d1e1ya_
   complexed with ifm, po4

Details for d2g9va1

PDB Entry: 2g9v, 2.15 Å

PDB Description: the crystal structure of glycogen phosphorylase in complex with (3r, 4r,5r)-5-hydroxymethylpiperidine-3,4-diol and phosphate

PDB Compounds: (A:) Glycogen phosphorylase, muscle form

SCOP Domain Sequences for d2g9va1:

Sequence, based on SEQRES records:

>d2g9va1 c.87.1.4 (A:13-836) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
isvrglagvenvtelkknfnrhlhftlvkdrnvatprdyyfalahtvrdhlvgrwirtqq
hyyekdpkriyylslefymgrtlqntmvnlalenacdeatyqlgldmeeleeieedaglg
ngglgrlaacfldsmatlglaaygygiryefgifnqkicggwqmeeaddwlrygnpweka
rpeftlpvhfygrvehtsqgakwvdtqvvlampydtpvpgyrnnvvntmrlwsakapndf
nlkdfnvggyiqavldrnlaenisrvlypndnffegkelrlkqeyfvvaatlqdiirrfk
sskfgcrdpvrtnfdafpdkvaiqlndthpslaipelmrvlvdlerldwdkawevtvktc
aytnhtvlpealerwpvhlletllprhlqiiyeinqrflnrvaaafpgdvdrlrrmslve
egavkrinmahlciagshavngvarihseilkktifkdfyelephkfqnktngitprrwl
vlcnpglaeiiaerigeeyisdldqlrkllsyvddeafirdvakvkqenklkfaaylere
ykvhinpnslfdvqvkriheykrqllnclhvitlynrikkepnkfvvprtvmiggkaapg
yhmakmiiklitaigdvvnhdpvvgdrlrviflenyrvslaekvipaadlseqistagte
asgtgnmkfmlngaltigtmdganvemaeeageenffifgmrvedvdrldqrgynaqeyy
dripelrqiieqlssgffspkqpdlfkdivnmlmhhdrfkvfadyeeyvkcqervsalyk
nprewtrmvirniatsgkfssdrtiaqyareiwgvepsrqrlpa

Sequence, based on observed residues (ATOM records):

>d2g9va1 c.87.1.4 (A:13-836) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
isvrglagvenvtelkknfnrhlhftlvkdrnvatprdyyfalahtvrdhlvgrwirtqq
hyyekdpkriyylslefymgrtlqntmvnlalenacdeatyqlgldmeeleeieedaglg
ngglgrlaacfldsmatlglaaygygiryefgifnqkicggwqmeeaddwlrygnpweka
rpeftlpvhfygrvehtsqgakwvdtqvvlampydtpvpgyrnnvvntmrlwsakapndf
nlgyiqavldrnlaenisrvlypnffegkelrlkqeyfvvaatlqdiirrfksstnfdaf
pdkvaiqlndthpslaipelmrvlvdlerldwdkawevtvktcaytnhtvlpealerwpv
hlletllprhlqiiyeinqrflnrvaaafpgdvdrlrrmslveegavkrinmahlciags
havngvarihseilkktifkdfyelephkfqnktngitprrwlvlcnpglaeiiaerige
eyisdldqlrkllsyvddeafirdvakvkqenklkfaaylereykvhinpnslfdvqvkr
iheykrqllnclhvitlynrikkepnkfvvprtvmiggkaapgyhmakmiiklitaigdv
vnhdpvvgdrlrviflenyrvslaekvipaadlseqistagteasgtgnmkfmlngalti
gtmdganvemaeeageenffifgmrvedvdrldqrgynaqeyydripelrqiieqlssgf
fspkqpdlfkdivnmlmhhdrfkvfadyeeyvkcqervsalyknprewtrmvirniatsg
kfssdrtiaqyareiwgvepsrqrlpa

Timeline for d2g9va1:

• d2g9va1 first appeared in SCOP 1.73
  
• d2g9va1 is called d2g9va_ in SCOPe 2.01
  
• d2g9va1 appears in the current release, SCOPe 2.08, called d2g9va_