Lineage for d2g5ib2 (2g5i B:2-293)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2538320Fold d.128: Glutamine synthetase/guanido kinase [55930] (1 superfamily)
    duplication: common core consists of two beta-alpha-beta2-alpha repeats
  4. 2538321Superfamily d.128.1: Glutamine synthetase/guanido kinase [55931] (6 families) (S)
  5. 2538574Family d.128.1.5: GatB/GatE catalytic domain-like [143812] (2 proteins)
    N-terminal and C-terminal parts correspond to Pfam PF02934 (GatB_N) and Pfam PF01162 (GatB), respectively
  6. 2538575Protein Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, GatB, N-terminal domain [143813] (1 species)
  7. 2538576Species Staphylococcus aureus [TaxId:1280] [143814] (5 PDB entries)
    Uniprot P64201 2-293
  8. 2538581Domain d2g5ib2: 2g5i B:2-293 [134664]
    Other proteins in same PDB: d2g5ia1, d2g5ib1, d2g5ic1
    automatically matched to 2DF4 B:2-293
    protein/RNA complex; complexed with adp, mg

Details for d2g5ib2

PDB Entry: 2g5i (more details), 3.35 Å

PDB Description: Structure of tRNA-Dependent Amidotransferase GatCAB complexed with ADP-AlF4
PDB Compounds: (B:) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B

SCOPe Domain Sequences for d2g5ib2:

Sequence; same for both SEQRES and ATOM records: (download)

>d2g5ib2 d.128.1.5 (B:2-293) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, GatB, N-terminal domain {Staphylococcus aureus [TaxId: 1280]}
hfetviglevhvelktdskmfspspahfgaepnsntnvidlaypgvlpvvnkravdwamr
aamalnmeiateskfdrknyfypdnpkayqisqfdqpigengyidievdgetkrigitrl
hmeedagksthkgeyslvdlnrqgtplieivsepdirspkeayayleklrsiiqytgvsd
vkmeegslrcdanislrpygqekfgtkaelknlnsfnyvrkgleyeekrqeeellnggei
gqetrrfdestgktilmrvkegsddyryfpepdivplyiddawkervrqtip

SCOPe Domain Coordinates for d2g5ib2:

Click to download the PDB-style file with coordinates for d2g5ib2.
(The format of our PDB-style files is described here.)

Timeline for d2g5ib2:

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Domains from same chain:
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d2g5ib1