SCOPe 2.06: Domain d2g5ia1: 2g5i A:1-485

Lineage for d2g5ia1 (2g5i A:1-485)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.117: Amidase signature (AS) enzymes [75303] (1 superfamily)
   possible duplication: the topologies of N- and C-terminal halves are similar; 3 layers: a/b/a; single mixed beta-sheet of 10 strands, order 213549A867 (A=10); strands from 5 to 9 are antiparallel to the rest

4. Superfamily c.117.1: Amidase signature (AS) enzymes [75304] (1 family)
   automatically mapped to Pfam PF01425

5. Family c.117.1.1: Amidase signature (AS) enzymes [75305] (5 proteins)

6. Protein Glutamyl-tRNA(Gln) amidotransferase subunit A [142738] (3 species)

7. Species Staphylococcus aureus [TaxId:1280] [142739] (5 PDB entries)
   Uniprot P63488 1-485

8. Domain d2g5ia1: 2g5i A:1-485 [134662]
   Other proteins in same PDB: d2g5ib1, d2g5ib2, d2g5ic1
   automatically matched to 2DF4 A:1-485
   protein/RNA complex; complexed with adp, mg

Details for d2g5ia1

PDB Entry: 2g5i, 3.35 Å

PDB Description: Structure of tRNA-Dependent Amidotransferase GatCAB complexed with ADP-AlF4

PDB Compounds: (A:) Glutamyl-tRNA(Gln) amidotransferase subunit A

SCOPe Domain Sequences for d2g5ia1:

Sequence; same for both SEQRES and ATOM records:

>d2g5ia1 c.117.1.1 (A:1-485) Glutamyl-tRNA(Gln) amidotransferase subunit A {Staphylococcus aureus [TaxId: 1280]}
msiryesvenlltlikdkkikpsdvvkdiydaieetdptiksflaldkenaikkaqelde
lqakdqmdgklfgipmgikdniitnglettcaskmlegfvpiyestvmeklhkenavlig
klnmdefamggstetsyfkktvnpfdhkavpggssggsaaavaaglvplslgsdtggsir
qpaaycgvvgmkptygrvsrfglvafassldqigpltrnvkdnaivleaisgadvndsts
apvddvdftseigkdikglkvalpkeylgegvaddvkeavqnavetlkslgavveevslp
ntkfgipsyyviasseassnlsrfdgirygyhskeahsleelykmsrsegfgkevkrrif
lgtfalssgyydayykksqkvrtlikndfdkvfenydvvvgptapttafnlgeeiddplt
myandllttpvnlaglpgisvpcgqsngrpiglqfigkpfdektlyrvayqyetqynlhd
vyekl

Timeline for d2g5ia1:

• d2g5ia1 first appeared in SCOP 1.73
  
• d2g5ia1 appears in SCOPe 2.05
  
• d2g5ia1 appears in SCOPe 2.07
  
• d2g5ia1 appears in the current release, SCOPe 2.08