Lineage for d2g25b2 (2g25 B:56-470)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2108258Fold c.36: Thiamin diphosphate-binding fold (THDP-binding) [52517] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465
  4. 2108259Superfamily c.36.1: Thiamin diphosphate-binding fold (THDP-binding) [52518] (9 families) (S)
    there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules
    two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules
  5. 2108664Family c.36.1.10: TK-like PP module [88760] (3 protein domains)
    different order of the modules, PP module is N-terminal, Pyr module is next to it followed by a Rossmann-like domain
  6. 2108665Protein Pyruvate dehydrogenase E1 component, PP module [88764] (1 species)
    E1A and E1B fused together in a single-chain protein
  7. 2108666Species Escherichia coli [TaxId:562] [88765] (8 PDB entries)
  8. 2108678Domain d2g25b2: 2g25 B:56-470 [134527]
    Other proteins in same PDB: d2g25a1, d2g25a3, d2g25b1, d2g25b3
    automated match to d1l8aa1
    complexed with mg, po4, tdk

Details for d2g25b2

PDB Entry: 2g25 (more details), 2.1 Å

PDB Description: E. Coli Pyruvate Dehydrogenase Phosphonolactylthiamin Diphosphate Complex
PDB Compounds: (B:) Pyruvate dehydrogenase E1 component

SCOPe Domain Sequences for d2g25b2:

Sequence; same for both SEQRES and ATOM records: (download)

>d2g25b2 c.36.1.10 (B:56-470) Pyruvate dehydrogenase E1 component, PP module {Escherichia coli [TaxId: 562]}

SCOPe Domain Coordinates for d2g25b2:

Click to download the PDB-style file with coordinates for d2g25b2.
(The format of our PDB-style files is described here.)

Timeline for d2g25b2: