SCOPe 2.08: Domain d2fykb1: 2fyk B:189-235

Lineage for d2fykb1 (2fyk B:189-235)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.34: SH3-like barrel [50036] (21 superfamilies)
   barrel, partly opened; n*=4, S*=8; meander
   the last strand is interrupted by a turn of 3-10 helix

4. Superfamily b.34.1: C-terminal domain of transcriptional repressors [50037] (4 families)
   the N-terminal domains of these repressors bind DNA

5. Family b.34.1.1: Biotin repressor (BirA) [50038] (2 proteins)
   automatically mapped to Pfam PF02237

6. Protein Biotin--[acetyl-CoA-carboxylase] ligase C-terminal domain [141186] (1 species)

7. Species Pyrococcus horikoshii [TaxId:53953] [141187] (27 PDB entries)
   Uniprot O57883 189-235

8. Domain d2fykb1: 2fyk B:189-235 [134376]
   Other proteins in same PDB: d2fyka2, d2fykb2
   automated match to d1wnla1
   complexed with adp, btn

Details for d2fykb1

PDB Entry: 2fyk, 1.6 Å

PDB Description: Crystal Structure Of Biotin Protein Ligase From Pyrococcus Horikoshii OT3 in complex with ADP and Biotin

PDB Compounds: (B:) biotin--protein ligase

SCOPe Domain Sequences for d2fykb1:

Sequence; same for both SEQRES and ATOM records:

>d2fykb1 b.34.1.1 (B:189-235) Biotin--[acetyl-CoA-carboxylase] ligase C-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
gvrvkilgdgsfegiaediddfgrliirldsgevkkviygdvslrfl

Timeline for d2fykb1:

• d2fykb1 first appeared in SCOP 1.73
  
• d2fykb1 appears in SCOPe 2.07