SCOPe 2.03: Domain d2fydd_: 2fyd D:

Lineage for d2fydd_ (2fyd D:)

1. Root: SCOPe 2.03

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.68: Nucleotide-diphospho-sugar transferases [53447] (1 superfamily)
   3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest

4. Superfamily c.68.1: Nucleotide-diphospho-sugar transferases [53448] (20 families)

5. Family c.68.1.2: beta 1,4 galactosyltransferase (b4GalT1) [53452] (2 proteins)

6. Protein automated matches [190297] (2 species)
   not a true protein

7. Species Cow (Bos taurus) [TaxId:9913] [187104] (2 PDB entries)

8. Domain d2fydd_: 2fyd D: [134368]
   Other proteins in same PDB: d2fyda_, d2fydb1, d2fydc_
   automated match to d1o0rb_
   complexed with bgc, ca, mes, mn, nga, pg4, udp

Details for d2fydd_

PDB Entry: 2fyd, 2 Å

PDB Description: catalytic domain of bovine beta 1, 4-galactosyltransferase in complex with alpha-lactalbumin, glucose, mn, and udp-n-acetylgalactosamine

PDB Compounds: (D:) beta-1,4-galactosyltransferase

SCOPe Domain Sequences for d2fydd_:

Sequence; same for both SEQRES and ATOM records:

>d2fydd_ c.68.1.2 (D:) automated matches {Cow (Bos taurus) [TaxId: 9913]}
ltacpeespllvgpmliefnipvdlklveqqnpkvklggrytpmdcisphkvaiiipfrn
rqehlkywlyylhpilqrqqldygiyvinqagesmfnrakllnvgfkealkdydyncfvf
sdvdlipmndhntyrcfsqprhisvamdkfgfslpyvqyfggvsalskqqflsingfpnn
ycgwggedddiynrlafrgmsvsrpnavigktrmirhsrdkknepnpqrfdriahtketm
lsdglnsltymvlevqryplytkitvdigtcs

Timeline for d2fydd_:

• d2fydd_ first appeared in SCOP 1.73, called d2fydd1
  
• d2fydd_ appears in SCOPe 2.02
  
• d2fydd_ appears in SCOPe 2.04
  
• d2fydd_ appears in the current release, SCOPe 2.08