Lineage for d2funb1 (2fun B:2222-2479)

  1. Root: SCOPe 2.03
  2. 1336837Class c: Alpha and beta proteins (a/b) [51349] (147 folds)
  3. 1355509Fold c.17: Caspase-like [52128] (1 superfamily)
    3 layers, a/b/a; core: mixed beta-sheet of 6 strands, order 213456, strand 6 is antiparallel to the rest
  4. 1355510Superfamily c.17.1: Caspase-like [52129] (3 families) (S)
    mature protein may be composed of two chains folded in a single domain
  5. 1355511Family c.17.1.1: Caspase catalytic domain [52130] (8 proteins)
  6. 1355585Protein Caspase-8 [52135] (1 species)
  7. 1355586Species Human (Homo sapiens) [TaxId:9606] [52136] (6 PDB entries)
  8. 1355601Domain d2funb1: 2fun B:2222-2479 [134181]
    Other proteins in same PDB: d2funa1, d2func1
    automatically matched to d1i4eb_

Details for d2funb1

PDB Entry: 2fun (more details), 3 Å

PDB Description: alternative p35-caspase-8 complex
PDB Compounds: (B:) caspase-8

SCOPe Domain Sequences for d2funb1:

Sequence, based on SEQRES records: (download)

>d2funb1 c.17.1.1 (B:2222-2479) Caspase-8 {Human (Homo sapiens) [TaxId: 9606]}
ldkvyqmkskprgycliinnhnfakarekvpklhsirdrngthldagaltttfeelhfei
kphhdctveqiyeilkiyqlmdhsnmdcficcilshgdkgiiygtdgqeapiyeltsqft
glkcpslagkpkvffiqacqgdnyqkgipvetdseeqpylemdlsspqtryipdeadfll
gmatvnncvsyrnpaegtwyiqslcqslrercprgddiltiltevnyevsnkddkknmgk
qmpqptftlrkklvfpsd

Sequence, based on observed residues (ATOM records): (download)

>d2funb1 c.17.1.1 (B:2222-2479) Caspase-8 {Human (Homo sapiens) [TaxId: 9606]}
ldkvyqmkskprgycliinnhnfakarekvpklhsirdrngthldagaltttfeelhfei
kphhdctveqiyeilkiyqlmdhsnmdcficcilshgdkgiiygtdgqeapiyeltsqft
glkcpslagkpkvffiqacqgdnyqkgipvetdtryipdeadfllgmatvnncvsyrnpa
egtwyiqslcqslrercprgddiltiltevnyevsnkddkknmgkqmpqptftlrkklvf
psd

SCOPe Domain Coordinates for d2funb1:

Click to download the PDB-style file with coordinates for d2funb1.
(The format of our PDB-style files is described here.)

Timeline for d2funb1: