SCOPe 2.02: Domain d2fugd1: 2fug D:35-409

Lineage for d2fugd1 (2fug D:35-409)

1. Root: SCOPe 2.02

2. Class e: Multi-domain proteins (alpha and beta) [56572] (66 folds)

3. Fold e.18: HydB/Nqo4-like [56761] (1 superfamily)
   3 domains: (1) all-alpha; (2&3) alpha+beta

4. Superfamily e.18.1: HydB/Nqo4-like [56762] (3 families)

5. Family e.18.1.2: Nqo4-like [144028] (1 protein)
   Pfam PF00346; Respiratory-chain NADH dehydrogenase, 49 Kd subunit

6. Protein NADH-quinone oxidoreductase chain 4, Nqo4 [144029] (1 species)

7. Species Thermus thermophilus [TaxId:274] [144030] (1 PDB entry)
   Uniprot Q56220 35-409

8. Domain d2fugd1: 2fug D:35-409 [134142]
   Other proteins in same PDB: d2fug11, d2fug12, d2fug13, d2fug21, d2fug31, d2fug32, d2fug33, d2fug34, d2fug51, d2fug61, d2fug71, d2fug91, d2fuga1, d2fuga2, d2fuga3, d2fugb1, d2fugc1, d2fugc2, d2fugc3, d2fugc4, d2fuge1, d2fugf1, d2fugg1, d2fugh1, d2fugj1, d2fugj2, d2fugj3, d2fugk1, d2fugl1, d2fugl2, d2fugl3, d2fugl4, d2fugn1, d2fugo1, d2fugp1, d2fugq1, d2fugs1, d2fugs2, d2fugs3, d2fugt1, d2fugu1, d2fugu2, d2fugu3, d2fugu4, d2fugw1, d2fugx1, d2fugy1, d2fugz1
   automatically matched to 2FUG 4:35-409
   complexed with fes, fmn, sf4

Details for d2fugd1

PDB Entry: 2fug, 3.3 Å

PDB Description: crystal structure of the hydrophilic domain of respiratory complex i from thermus thermophilus

PDB Compounds: (D:) NADH-quinone oxidoreductase chain 4

SCOPe Domain Sequences for d2fugd1:

Sequence, based on SEQRES records:

>d2fugd1 e.18.1.2 (D:35-409) NADH-quinone oxidoreductase chain 4, Nqo4 {Thermus thermophilus [TaxId: 274]}
psthgvlrlmvtlsgeevlevvphigylhtgfektmehrtylqnitytprmdylhsfahd
layalavekllgavvppraetirvilnelsrlashlvflgtglldlgaltpffyafrere
tildlfewvtgqrfhhnyiriggvkedlpeefvpelkkllevlphrideyealfaespif
yerargvgvippevaidlgltggslrasgvnydvrkaypysgyetytfdvplgergdvfd
rmlvriremresvkiikqalerlepgpvrdpnpqitppprhlletsmeaviyhfkhyteg
fhppkgevyvptesargelgyyivsdggsmpyrvkvrapsfvnlqslpyackgeqvpdmv
aiiasldpvmgdvdr

Sequence, based on observed residues (ATOM records):

>d2fugd1 e.18.1.2 (D:35-409) NADH-quinone oxidoreductase chain 4, Nqo4 {Thermus thermophilus [TaxId: 274]}
psthgvlrlmvtlsgeevlevvphigylhtgfektmehrtylqnitytprmdylhsfahd
layalavekllgavvppraetirvilnelsrlashlvflgtglldlgaltpffyafrere
tildlfewvtgqrfhhnyiriggvkedlpeefvpelkkllevlphrideyealfaespif
yerargvgvippevaidlgltggslrasgvnydvrkaypysgydvplgergdvfdrmlvr
iremresvkiikqalerlepgpvrdpnpqitppprhlletsmeaviyhfkhytegfhppk
gevyvptesargelgyyivsdggsmpyrvkvrapsfvnlqslpyackgeqvpdmvaiias
ldpvmgdvdr

Timeline for d2fugd1:

• d2fugd1 first appeared in SCOP 1.73
  
• d2fugd1 appears in SCOPe 2.01
  
• d2fugd1 appears in SCOPe 2.03
  
• d2fugd1 appears in the current release, SCOPe 2.08