SCOP 1.73: Domain d2fu5b1: 2fu5 B:10-123

Lineage for d2fu5b1 (2fu5 B:10-123)

1. Root: SCOP 1.73

2. Class b: All beta proteins [48724] (165 folds)

3. Fold b.88: Mss4-like [51315] (1 superfamily)
   complex fold made of several coiled beta-sheets

4. Superfamily b.88.1: Mss4-like [51316] (4 families)
   duplication: tandem repeat of two similar structural motifs

5. Family b.88.1.1: RabGEF Mss4 [51317] (1 protein)
   contains zinc-binding site

6. Protein RabGEF Mss4 [51318] (2 species)

7. Species Human (Homo sapiens) [TaxId:9606] [51320] (2 PDB entries)

8. Domain d2fu5b1: 2fu5 B:10-123 [134103]
   Other proteins in same PDB: d2fu5c1, d2fu5d1
   automatically matched to 2FU5 A:10-123
   complexed with bme, zn

Details for d2fu5b1

PDB Entry: 2fu5, 2 Å

PDB Description: structure of rab8 in complex with mss4

PDB Compounds: (B:) Guanine nucleotide exchange factor MSS4

SCOP Domain Sequences for d2fu5b1:

Sequence, based on SEQRES records:

>d2fu5b1 b.88.1.1 (B:10-123) RabGEF Mss4 {Human (Homo sapiens) [TaxId: 9606]}
mvsaegrnrkavlcqrcgsrvlqpgtalfsrrqlflpsmrkkpalsdgsnpdgdllqehw
lvedmfifenvgftkdvgnikflvcadceigpigwhclddknsfyvalervshe

Sequence, based on observed residues (ATOM records):

>d2fu5b1 b.88.1.1 (B:10-123) RabGEF Mss4 {Human (Homo sapiens) [TaxId: 9606]}
mvsaegrnrkavlcqrcgsrvlqpgtalfsrrqlflpsmrkdgdllqehwlvedmfifen
vgftkdvgnikflvcadceigpigwhclddknsfyvalervshe

Timeline for d2fu5b1:

• d2fu5b1 is new in SCOP 1.73
  
• d2fu5b1 appears in SCOP 1.75
  
• d2fu5b1 appears in the current release, SCOPe 2.08, called d2fu5b2