Lineage for d2fu5b2 (2fu5 B:11-123)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2407553Fold b.88: Mss4-like [51315] (2 superfamilies)
    complex fold made of several coiled beta-sheets
  4. 2407554Superfamily b.88.1: Mss4-like [51316] (5 families) (S)
    duplication: tandem repeat of two similar structural motifs
  5. 2407555Family b.88.1.1: RabGEF Mss4 [51317] (1 protein)
    contains zinc-binding site
    automatically mapped to Pfam PF04421
  6. 2407556Protein RabGEF Mss4 [51318] (2 species)
  7. 2407557Species Human (Homo sapiens) [TaxId:9606] [51320] (2 PDB entries)
  8. 2407559Domain d2fu5b2: 2fu5 B:11-123 [134103]
    Other proteins in same PDB: d2fu5a2, d2fu5b3, d2fu5c1, d2fu5d_
    automated match to d1fwqa_
    complexed with bme, zn

Details for d2fu5b2

PDB Entry: 2fu5 (more details), 2 Å

PDB Description: structure of rab8 in complex with mss4
PDB Compounds: (B:) Guanine nucleotide exchange factor MSS4

SCOPe Domain Sequences for d2fu5b2:

Sequence, based on SEQRES records: (download)

>d2fu5b2 b.88.1.1 (B:11-123) RabGEF Mss4 {Human (Homo sapiens) [TaxId: 9606]}
vsaegrnrkavlcqrcgsrvlqpgtalfsrrqlflpsmrkkpalsdgsnpdgdllqehwl
vedmfifenvgftkdvgnikflvcadceigpigwhclddknsfyvalervshe

Sequence, based on observed residues (ATOM records): (download)

>d2fu5b2 b.88.1.1 (B:11-123) RabGEF Mss4 {Human (Homo sapiens) [TaxId: 9606]}
vsaegrnrkavlcqrcgsrvlqpgtalfsrrqlflpsmrkdgdllqehwlvedmfifenv
gftkdvgnikflvcadceigpigwhclddknsfyvalervshe

SCOPe Domain Coordinates for d2fu5b2:

Click to download the PDB-style file with coordinates for d2fu5b2.
(The format of our PDB-style files is described here.)

Timeline for d2fu5b2: