SCOP 1.73: Domain d2fseb1: 2fse B:93-190

Lineage for d2fseb1 (2fse B:93-190)

1. Root: SCOP 1.73

2. Class b: All beta proteins [48724] (165 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (27 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (4 families)

5. Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (23 proteins)

6. Protein Class II MHC beta chain, C-terminal domain [88625] (6 species)

7. Species Human (Homo sapiens), HLA-DR group [TaxId:9606] [88628] (38 PDB entries)
   probably orthologous to the mouse I-E group

8. Domain d2fseb1: 2fse B:93-190 [134019]
   Other proteins in same PDB: d2fsea1, d2fsea2, d2fseb2, d2fsec1, d2fsec2, d2fsed2
   automatically matched to d1d5xb1

Details for d2fseb1

PDB Entry: 2fse, 3.1 Å

PDB Description: crystallographic structure of a rheumatoid arthritis mhc susceptibility allele, hla-dr1 (drb1*0101), complexed with the immunodominant determinant of human type ii collagen

PDB Compounds: (B:) HLA class II histocompatibility antigen, DRB1-1 beta chain

SCOP Domain Sequences for d2fseb1:

Sequence; same for both SEQRES and ATOM records:

>d2fseb1 b.1.1.2 (B:93-190) Class II MHC beta chain, C-terminal domain {Human (Homo sapiens), HLA-DR group [TaxId: 9606]}
rrveptvtvyptktqplqhhnllvcsvsdfypgnievrwfrngkeeetgivstglvrngd
wtfqtlvmletvpqsgevytcqvehpsltdpvtvewka

Timeline for d2fseb1:

• d2fseb1 is new in SCOP 1.73
  
• d2fseb1 appears in SCOP 1.75
  
• d2fseb1 appears in the current release, SCOPe 2.08