SCOPe 2.07: Domain d2fn3a3: 2fn3 A:342-525

Lineage for d2fn3a3 (2fn3 A:342-525)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.36: Thiamin diphosphate-binding fold (THDP-binding) [52517] (1 superfamily)
   3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465

4. Superfamily c.36.1: Thiamin diphosphate-binding fold (THDP-binding) [52518] (9 families)
   there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules
   two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules

5. Family c.36.1.0: automated matches [227300] (1 protein)
   not a true family

6. Protein automated matches [227126] (21 species)
   not a true protein

7. Species Pseudomonas putida [TaxId:303] [254984] (38 PDB entries)

8. Domain d2fn3a3: 2fn3 A:342-525 [133805]
   Other proteins in same PDB: d2fn3a1
   automated match to d1q6za3
   complexed with ca, mg, tzd; mutant

Details for d2fn3a3

PDB Entry: 2fn3, 1 Å

PDB Description: high resolution structure of s26a mutant of benzoylformate decarboxylase from pseudomonas putida complexed with thiamine thiazolone diphosphate

PDB Compounds: (A:) Benzoylformate decarboxylase

SCOPe Domain Sequences for d2fn3a3:

Sequence; same for both SEQRES and ATOM records:

>d2fn3a3 c.36.1.0 (A:342-525) automated matches {Pseudomonas putida [TaxId: 303]}
epakvdqdagrlhpetvfdtlndmapenaiylneststtaqmwqrlnmrnpgsyyfcaag
glgfalpaaigvqlaeperqviavigdgsanysisalwtaaqyniptifvimnngtygal
rwfagvleaenvpgldvpgidfralakgygvqalkadnleqlkgslqealsakgpvliev
stvs

Timeline for d2fn3a3:

• d2fn3a3 first appeared in SCOP 1.73
  
• d2fn3a3 appears in SCOPe 2.06
  
• d2fn3a3 appears in the current release, SCOPe 2.08