Lineage for d2fika2 (2fik A:8-185)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2163004Fold d.19: MHC antigen-recognition domain [54451] (1 superfamily)
    dimeric
  4. 2163005Superfamily d.19.1: MHC antigen-recognition domain [54452] (2 families) (S)
  5. 2163006Family d.19.1.1: MHC antigen-recognition domain [54453] (13 protein domains)
  6. 2163007Protein CD1, alpha-1 and alpha-2 domains [54456] (5 species)
    Class I MHC-related
  7. 2163048Species Mouse (Mus musculus) [TaxId:10090] [54457] (25 PDB entries)
  8. 2163056Domain d2fika2: 2fik A:8-185 [133525]
    Other proteins in same PDB: d2fika1, d2fikb_
    automated match to d3gmla1
    complexed with gsl, nag, plm

Details for d2fika2

PDB Entry: 2fik (more details), 1.8 Å

PDB Description: Structure of a microbial glycosphingolipid bound to mouse CD1d
PDB Compounds: (A:) T-cell surface glycoprotein CD1d1

SCOPe Domain Sequences for d2fika2:

Sequence, based on SEQRES records: (download)

>d2fika2 d.19.1.1 (A:8-185) CD1, alpha-1 and alpha-2 domains {Mouse (Mus musculus) [TaxId: 10090]}
ytfrclqmssfanrswsrtdsvvwlgdlqthrwsndsatisftkpwsqgklsnqqweklq
hmfqvyrvsftrdiqelvkmmspkedypieiqlsagcemypgnasesflhvafqgkyvvr
fwgtswqtvpgapswldlpikvlnadqgtsatvqmllndtcplfvrglleagksdlek

Sequence, based on observed residues (ATOM records): (download)

>d2fika2 d.19.1.1 (A:8-185) CD1, alpha-1 and alpha-2 domains {Mouse (Mus musculus) [TaxId: 10090]}
ytfrclqmssfanrswsrtdsvvwlgdlqthrwsndsatisftkpwsqgklsnqqweklq
hmfqvyrvsftrdiqelvkypieiqlsagcemypgnasesflhvafqgkyvvrfwgtswq
tvpgapswldlpikvlnadqgtsatvqmllndtcplfvrglleagksdlek

SCOPe Domain Coordinates for d2fika2:

Click to download the PDB-style file with coordinates for d2fika2.
(The format of our PDB-style files is described here.)

Timeline for d2fika2:

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Domains from same chain:
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d2fika1
View in 3D
Domains from other chains:
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d2fikb_