Lineage for d2fifb_ (2fif B:)

  1. Root: SCOPe 2.08
  2. 3029608Class g: Small proteins [56992] (100 folds)
  3. 3035586Fold g.39: Glucocorticoid receptor-like (DNA-binding domain) [57715] (1 superfamily)
    alpha+beta metal(zinc)-bound fold
  4. 3035587Superfamily g.39.1: Glucocorticoid receptor-like (DNA-binding domain) [57716] (19 families) (S)
  5. 3036119Family g.39.1.15: A20-like zinc finger [144187] (1 protein)
    Pfam PF01754
  6. 3036120Protein RabGEF1 (Rabex-5), ubiquitin-binding domain [144188] (2 species)
    binds to ubiquitin with the extended C-terminal helix
  7. 3036121Species Cow (Bos taurus) [TaxId:9913] [144189] (2 PDB entries)
    Uniprot O18973 14-73
  8. 3036122Domain d2fifb_: 2fif B: [133519]
    Other proteins in same PDB: d2fifa_, d2fifc_, d2fife_
    automated match to d2fidb1
    complexed with so4, zn

Details for d2fifb_

PDB Entry: 2fif (more details), 2.49 Å

PDB Description: Crystal Structure of a Bovine Rabex-5 fragment complexed with ubiquitin
PDB Compounds: (B:) Rab5 GDP/GTP exchange factor

SCOPe Domain Sequences for d2fifb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d2fifb_ g.39.1.15 (B:) RabGEF1 (Rabex-5), ubiquitin-binding domain {Cow (Bos taurus) [TaxId: 9913]}

SCOPe Domain Coordinates for d2fifb_:

Click to download the PDB-style file with coordinates for d2fifb_.
(The format of our PDB-style files is described here.)

Timeline for d2fifb_: