Lineage for d2fida_ (2fid A:)

  1. Root: SCOPe 2.02
  2. 1190016Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1194674Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. 1194675Superfamily d.15.1: Ubiquitin-like [54236] (9 families) (S)
  5. 1194676Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
    Pfam PF00240
  6. 1194811Protein Ubiquitin [54238] (4 species)
  7. 1194820Species Human (Homo sapiens) [TaxId:9606] [54239] (101 PDB entries)
    Uniprot P62988
    identical sequence in many other species
  8. 1194969Domain d2fida_: 2fid A: [133516]
    Other proteins in same PDB: d2fidb1
    automated match to d1aara_
    complexed with zn

Details for d2fida_

PDB Entry: 2fid (more details), 2.8 Å

PDB Description: Crystal Structure of a Bovine Rabex-5 fragment complexed with ubiquitin
PDB Compounds: (A:) Ubiquitin

SCOPe Domain Sequences for d2fida_:

Sequence; same for both SEQRES and ATOM records: (download)

>d2fida_ d.15.1.1 (A:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrl

SCOPe Domain Coordinates for d2fida_:

Click to download the PDB-style file with coordinates for d2fida_.
(The format of our PDB-style files is described here.)

Timeline for d2fida_: