SCOPe 2.03: Domain d2fdsb_: 2fds B:

Lineage for d2fdsb_ (2fds B:)

1. Root: SCOPe 2.03

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.2: Ribulose-phoshate binding barrel [51366] (7 families)

5. Family c.1.2.3: Decarboxylase [51375] (4 proteins)

6. Protein automated matches [190130] (11 species)
   not a true protein

7. Species Plasmodium berghei [TaxId:5821] [187698] (1 PDB entry)

8. Domain d2fdsb_: 2fds B: [133321]
   Other proteins in same PDB: d2fdsa1
   automated match to d2fdsa1
   complexed with iod

Details for d2fdsb_

PDB Entry: 2fds, 1.72 Å

PDB Description: crystal structure of plasmodium berghei orotidine 5'-monophosphate decarboxylase (ortholog of plasmodium falciparum pf10_0225)

PDB Compounds: (B:) orotidine-monophosphate-decarboxylase

SCOPe Domain Sequences for d2fdsb_:

Sequence, based on SEQRES records:

>d2fdsb_ c.1.2.3 (B:) automated matches {Plasmodium berghei [TaxId: 5821]}
hfktklknrrnevntclcigldpdeddiknfmrneekngyknvknnmnsnnnrienviki
gkeilltdeenienlseedkffyffnhfcfyiinntkeyaliykmnfafyipygsvgina
lknvfdylnsmniptmldmkindigntvknyrkfifeylksdsctinvymgtsmlkdicf
dyeknkyysayvlikttnkdsfifqnelsindkqayivmaeetqkmatdlkidqnnefig
fvvgsnafeemkiirnkfpdsyilspgigaqngdlyktlkngynkdyekllinvgraitk
spnpkkssesyynqiiqifkdien

Sequence, based on observed residues (ATOM records):

>d2fdsb_ c.1.2.3 (B:) automated matches {Plasmodium berghei [TaxId: 5821]}
hfktklknrrnevntclcigldpdeddiknfmrneekngyknvknnmnsnnnrienviki
gkeilltdeenienlseedkffyffnhfcfyiinntkeyaliykmnfafyipygsvgina
lknvfdylnsmniptmldmkindigntvknyrkfifeylksdsctinvymgtsmlkdicf
dyeknkyysayvlikttnkdsfifqnelsindkqayivmaeetqkmatdlkidqnnefig
fvvgsnafeemkiirnkfpdsyilspgidlyktlkngynkdyekllinvgraitkspnpk
kssesyynqiiqifkdien

Timeline for d2fdsb_:

• d2fdsb_ first appeared in SCOP 1.73, called d2fdsb1
  
• d2fdsb_ appears in SCOPe 2.02
  
• d2fdsb_ appears in SCOPe 2.04
  
• d2fdsb_ appears in the current release, SCOPe 2.08