Lineage for d2fdea1 (2fde A:1-99)

  1. Root: SCOP 1.75
  2. 781541Class b: All beta proteins [48724] (174 folds)
  3. 803906Fold b.50: Acid proteases [50629] (1 superfamily)
    barrel, closed; n=6, S=10, complex topology
  4. 803907Superfamily b.50.1: Acid proteases [50630] (3 families) (S)
  5. 803908Family b.50.1.1: Retroviral protease (retropepsin) [50631] (8 proteins)
    dimer of identical mono-domain chains, each containing (6,10) barrel
  6. 803924Protein Human immunodeficiency virus type 1 protease [50632] (1 species)
  7. 803925Species Human immunodeficiency virus type 1 [TaxId:11676] [50633] (247 PDB entries)
    Uniprot P35963 57-155
    Uniprot P04587 69-167
    Uniprot P03366 69-167
    Uniprot P03367 69-167
    Uniprot P03368 69-167
    Uniprot P35963 57-155 ! Uniprot P04587 69-167 ! Uniprot P03366 69-167 ! Uniprot P03367 69-167 ! Uniprot P03368 69-167
  8. 804387Domain d2fdea1: 2fde A:1-99 [133306]
    automatically matched to d1ajva_
    complexed with 385, k

Details for d2fdea1

PDB Entry: 2fde (more details), 2.7 Å

PDB Description: Wild type HIV protease bound with GW0385
PDB Compounds: (A:) Gag-Pol polyprotein

SCOP Domain Sequences for d2fdea1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2fdea1 b.50.1.1 (A:1-99) Human immunodeficiency virus type 1 protease {Human immunodeficiency virus type 1 [TaxId: 11676]}
pqitlwqrplvtikiggqlkealldtgaddtvleemslpgrwkpkmiggiggfikvrqyd
qilieicghkaigtvlvgptpvniigrnlltqigctlnf

SCOP Domain Coordinates for d2fdea1:

Click to download the PDB-style file with coordinates for d2fdea1.
(The format of our PDB-style files is described here.)

Timeline for d2fdea1: