Lineage for d2f6md_ (2f6m D:)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1979497Fold a.2: Long alpha-hairpin [46556] (20 superfamilies)
    2 helices; antiparallel hairpin, left-handed twist
  4. 1980298Superfamily a.2.17: Endosomal sorting complex assembly domain [140111] (3 families) (S)
    forms 'fan'-like heterooligomers, in which the domains of different subunit make similar interactions at the tip of the hairpin
  5. 1980308Family a.2.17.2: VPS28 N-terminal domain [140115] (2 protein domains)
    includes structurally variable linker region
  6. 1980309Protein Vacuolar protein sorting-associated protein 28, VPS28 [140116] (1 species)
  7. 1980310Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [140117] (3 PDB entries)
    Uniprot Q02767 15-125! Uniprot Q02767 23-123
  8. 1980312Domain d2f6md_: 2f6m D: [133054]
    Other proteins in same PDB: d2f6ma2, d2f6ma3, d2f6mb3, d2f6mc2, d2f6mc3
    automated match to d2f6mb1
    complexed with ddq, mg

Details for d2f6md_

PDB Entry: 2f6m (more details), 2.1 Å

PDB Description: Structure of a Vps23-C:Vps28-N subcomplex
PDB Compounds: (D:) vacuolar protein sorting-associated protein vps28

SCOPe Domain Sequences for d2f6md_:

Sequence; same for both SEQRES and ATOM records: (download)

>d2f6md_ a.2.17.2 (D:) Vacuolar protein sorting-associated protein 28, VPS28 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

SCOPe Domain Coordinates for d2f6md_:

Click to download the PDB-style file with coordinates for d2f6md_.
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Timeline for d2f6md_: