SCOPe 2.08: Domain d2etwa_: 2etw A:

Lineage for d2etwa_ (2etw A:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (9 superfamilies)
   sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold

4. Superfamily b.2.5: p53-like transcription factors [49417] (8 families)

5. Family b.2.5.7: DNA-binding domain from NDT80 [81992] (1 protein)

6. Protein DNA-binding domain from NDT80 [81993] (1 species)
   common fold is decorated with many additional structures

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [81994] (14 PDB entries)

8. Domain d2etwa_: 2etw A: [132374]
   automated match to d1mnna_
   protein/DNA complex

Details for d2etwa_

PDB Entry: 2etw, 1.67 Å

PDB Description: principles of protein-dna recognition revealed in the structural analysis of ndt80-mse dna complexes

PDB Compounds: (A:) NDT80 protein

SCOPe Domain Sequences for d2etwa_:

Sequence, based on SEQRES records:

>d2etwa_ b.2.5.7 (A:) DNA-binding domain from NDT80 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
viltqlnedgttsnyfdkrklkiaprstlqfkvgppfelvrdycpvveshtgrtldlrii
pridrgfdhideewvgykrnyftlvstfetancdldtflkssfdllvedssvegrlrvqy
faikikaknddddteinlvqhtakrdkgpqfcpsvcplvpsplpkhqtireasnvrnitk
mkkydstfylhrdhvnyeeygvdsllfsypedsiqkvaryervqfassisvkkpsqqnkh
fslhvilgavvdpdtfhgenpgipydelalkngskgmfvylqemktppliirgrspsnya
ssq

Sequence, based on observed residues (ATOM records):

>d2etwa_ b.2.5.7 (A:) DNA-binding domain from NDT80 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
viltqlnedgttsnyfdkrklkiaprstlqfkvgppfelvrdycpvveshtgrtldlrii
pridrgfdhideewvgykrnyftlvstfetancdldtflkssfdllvedssvegrlrvqy
faikikaknddddteinlvqhtakrdkgpqfcpsvcplvpsplpkhqtireasnvrnitk
mkkydstfylhrdhvnyeeygvdsllfsypedsiqkvaryervqfassisvkkpsqqnkh
fslhvilgavvdpdpgipydelalkngskgmfvylqemktppliirgrspsnyassq

Timeline for d2etwa_:

• d2etwa_ first appeared in SCOP 1.73, called d2etwa1
  
• d2etwa_ appears in SCOPe 2.07