Lineage for d2e2hb1 (2e2h B:20-1223)

  1. Root: SCOP 1.73
  2. 742018Class e: Multi-domain proteins (alpha and beta) [56572] (53 folds)
  3. 744107Fold e.29: beta and beta-prime subunits of DNA dependent RNA-polymerase [64483] (1 superfamily)
    Multidomain subunits of complex domain organization
  4. 744108Superfamily e.29.1: beta and beta-prime subunits of DNA dependent RNA-polymerase [64484] (2 families) (S)
    The catalytic site is formed by the association of two double-psi beta-barrel domains, one from each subunit
  5. 744109Family e.29.1.1: RNA-polymerase beta [64485] (2 proteins)
  6. 744110Protein RBP2 [64491] (1 species)
  7. 744111Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [64492] (24 PDB entries)
  8. 744135Domain d2e2hb1: 2e2h B:20-1223 [131982]
    Other proteins in same PDB: d2e2ha1, d2e2hc1, d2e2hc2, d2e2he1, d2e2he2, d2e2hf1, d2e2hh1, d2e2hi1, d2e2hi2, d2e2hj1, d2e2hk1, d2e2hl1
    automatically matched to d1i50b_
    complexed with gtp, mg, zn

Details for d2e2hb1

PDB Entry: 2e2h (more details), 3.95 Å

PDB Description: RNA polymerase II elongation complex at 5 mM Mg2+ with GTP
PDB Compounds: (B:) DNA-directed RNA polymerase II 140 kDa polypeptide

SCOP Domain Sequences for d2e2hb1:

Sequence, based on SEQRES records: (download)

>d2e2hb1 e.29.1.1 (B:20-1223) RBP2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstlileqlaqhtt
esdnisrkyeisfgkiyvtkpmvnesdgvthalypqearlrnltyssglfvdvkkrtyea
idvpgrelkyeliaeeseddsesgkvfigrlpimlrskncylseatesdlyklkecpfdm
ggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsrfistlqvkly
gregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqmlemlkpcve
dgfviqdretaldfigrrgtalgikkekriqyakdilqkeflphitqlegfesrkafflg
yminrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtveea
hdfnmklainaktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtn
tpigrdgklakprqlhnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitfls
ewgmepledyvphqspdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdi
rekelkiftdagrvyrplfiveddeslghkelkvrkghiaklmateyqdieggfedveey
twssllneglveyidaeeeesiliamqpedlepaeaneendldvdpakrirvshhattft
hceihpsmilgvaasiipfpdhnqsprntyqsamgkqamgvfltnynvrmdtmanilyyp
qkplgttrameylkfrelpagqnaivaiacysgynqedsmimnqssidrglfrslffrsy
mdqekkygmsitetfekpqrtntlrmkhgtydkldddgliapgvrvsgedviigkttpis
pdeeelgqrtayhskrdastplrstengivdqvlvttnqdglkfvkvrvrttkipqigdk
fasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahliecllskvaalsg
negdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiffgptyyqrlrhmv
ddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasflkerlmeasdafr
vhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqelmamnitprlytd
rsrd

Sequence, based on observed residues (ATOM records): (download)

>d2e2hb1 e.29.1.1 (B:20-1223) RBP2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
desapitaedswavisaffrekglvsqqldsfnqfvdytlqdiicedstliisfgkiyvt
kpmvnesdgvthalypqearlrnltyssglfvdvkvfigrlpimlrskncylseatesdl
yklkecpfdmggyfiingsekvliaqersagnivqvfkkaapspishvaeirsalekgsi
stlqvklygregssartikatlpyikqdipiviifralgiipdgeilehicydvndwqml
emlkpcvedgfviqdretaldfigkekriqyakdilqkeflphitqlegfesrkafflgy
minrlllcaldrkdqddrdhfgkkrldlagpllaqlfktlfkkltkdifrymqrtvelai
naktitsglkyalatgnwgeqkkamssragvsqvlnrytysstlshlrrtntpiakprql
hnthwglvcpaetpegqacglvknlslmscisvgtdpmpiitflsewgmepledyvphqs
pdatrvfvngvwhgvhrnparlmetlrtlrrkgdinpevsmirdirekelkiftdagrvy
rplfiveddeslghkelkvrkghiaklmateyqdeytwssllneglveyidaeeeesili
amqpedlepaedvdpakrirvsattfthceihpsmilgvaasiipfpdhnqsprntyqsa
mgkqamgvfltnynvrmdtmanilyypqkplgttrameylkfrelpagqnaivaiacysg
ynqedsmimnqssidrglfrslffrsymdqekkygmsitetfekpqrtntlrmkhgtydk
ldddgliapgvrvsgedviigkttpisrdastplrstengivdqvlvttnqdglkfvkvr
vrttkipqigdkfasrhgqkgtigityrredmpftaegivpdliinphaipsrmtvahli
ecllskvaalsgnegdaspftditvegiskllrehgyqsrgfevmynghtgkklmaqiff
gptyyqrlrhmvddkiharargpmqvltrqpvegrsrdgglrfgemerdcmiahgaasfl
kerlmeasdafrvhicgicglmtviaklnhnqfeckgcdnkidiyqihipyaakllfqel
mamnitprlytdrsrd

SCOP Domain Coordinates for d2e2hb1:

Click to download the PDB-style file with coordinates for d2e2hb1.
(The format of our PDB-style files is described here.)

Timeline for d2e2hb1: