SCOPe 2.04: Domain d2dt3a1: 2dt3 A:1-239,A:308-362

Lineage for d2dt3a1 (2dt3 A:1-239,A:308-362)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.5: Type II chitinase [51534] (15 proteins)
   glycosylase family 18

6. Protein Signal processing protein (SPC-40, MGP-40) [89480] (5 species)
   secreted during involution

7. Species Goat (Capra hircus) [TaxId:9925] [89481] (14 PDB entries)

8. Domain d2dt3a1: 2dt3 A:1-239,A:308-362 [131706]
   Other proteins in same PDB: d2dt3a2
   automatically matched to d1ljya1

Details for d2dt3a1

PDB Entry: 2dt3, 2.28 Å

PDB Description: crystal structure of the complex formed between goat signalling protein and the hexasaccharide at 2.28 a resolution

PDB Compounds: (A:) Chitinase-3-like protein 1

SCOPe Domain Sequences for d2dt3a1:

Sequence; same for both SEQRES and ATOM records:

>d2dt3a1 c.1.8.5 (A:1-239,A:308-362) Signal processing protein (SPC-40, MGP-40) {Goat (Capra hircus) [TaxId: 9925]}
yklicyytswsqyregdgscfpdaidpflcthviysfanisnneidtwewndvtlydtln
tlknrnpklktllsvggwnfgperfskiasktqsrrtfiksvppflrthgfdgldlawly
pgrrdkrhltalvkemkaefareaqagterlllsaavsagkiaidrgydiaqisrhldfi
slltydfhgawrqtvghhsplfrgnsdassrfsnadyavsymlrlgapanklvmgiptXd
dqesvknkarylknrqlagamvwaldlddfrgtfcgqnltfpltsavkdvlarv

Timeline for d2dt3a1:

• d2dt3a1 first appeared in SCOP 1.73
  
• d2dt3a1 appears in SCOPe 2.03
  
• d2dt3a1 appears in SCOPe 2.05
  
• d2dt3a1 appears in the current release, SCOPe 2.08