Lineage for d2dpua_ (2dpu A:)

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2305222Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. 2306394Superfamily a.4.5: "Winged helix" DNA-binding domain [46785] (86 families) (S)
    contains a small beta-sheet (wing)
  5. 2306619Family a.4.5.7: Replication terminator protein (RTP) [46807] (1 protein)
    automatically mapped to Pfam PF02334
  6. 2306620Protein Replication terminator protein (RTP) [46808] (1 species)
    contains long helix in the C-terminal extension; forms dimer similar to the LysR-like dimer
  7. 2306621Species Bacillus subtilis [TaxId:1423] [46809] (7 PDB entries)
  8. 2306638Domain d2dpua_: 2dpu A: [131617]
    automated match to d1bm9a_
    protein/DNA complex

Details for d2dpua_

PDB Entry: 2dpu (more details), 3.1 Å

PDB Description: crystal structure of the replication termination protein in complex with a pseudosymmetric 21mer b-site dna
PDB Compounds: (A:) Replication termination protein

SCOPe Domain Sequences for d2dpua_:

Sequence; same for both SEQRES and ATOM records: (download)

>d2dpua_ a.4.5.7 (A:) Replication terminator protein (RTP) {Bacillus subtilis [TaxId: 1423]}
stgflvkqraflklymitmteqerlyglkllevlrsefkeigfkpnhtevyrslhelldd
gilkqikvkkegaklqevvlyqfkdyeaaklykkqlkveldrskkliekalsdnf

SCOPe Domain Coordinates for d2dpua_:

Click to download the PDB-style file with coordinates for d2dpua_.
(The format of our PDB-style files is described here.)

Timeline for d2dpua_: