Lineage for d2dpua_ (2dpu A:)

  1. Root: SCOPe 2.08
  2. Class a: All alpha proteins [46456] (290 folds)
  3. Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. Superfamily a.4.5: 'Winged helix' DNA-binding domain [46785] (86 families) (S)
    contains a small beta-sheet (wing)
  5. Family a.4.5.7: Replication terminator protein (RTP) [46807] (1 protein)
    automatically mapped to Pfam PF02334
  6. Protein Replication terminator protein (RTP) [46808] (1 species)
    contains long helix in the C-terminal extension; forms dimer similar to the LysR-like dimer
  7. Species Bacillus subtilis [TaxId:1423] [46809] (7 PDB entries)
  8. Domain d2dpua_: 2dpu A: [131617]
    automated match to d1bm9a_
    protein/DNA complex

Details for d2dpua_

PDB Entry: 2dpu (more details), 3.1 Å

PDB Description: crystal structure of the replication termination protein in complex with a pseudosymmetric 21mer b-site dna
PDB Compounds: (A:) Replication termination protein

SCOPe Domain Sequences for d2dpua_:

Sequence; same for both SEQRES and ATOM records: (download)

>d2dpua_ a.4.5.7 (A:) Replication terminator protein (RTP) {Bacillus subtilis [TaxId: 1423]}
stgflvkqraflklymitmteqerlyglkllevlrsefkeigfkpnhtevyrslhelldd
gilkqikvkkegaklqevvlyqfkdyeaaklykkqlkveldrskkliekalsdnf

SCOPe Domain Coordinates for d2dpua_ are not available.

Timeline for d2dpua_: