Lineage for d2dnta1 (2dnt A:8-72)

  1. Root: SCOPe 2.08
  2. Class b: All beta proteins [48724] (180 folds)
  3. Fold b.34: SH3-like barrel [50036] (21 superfamilies)
    barrel, partly opened; n*=4, S*=8; meander
    the last strand is interrupted by a turn of 3-10 helix
  4. Superfamily b.34.13: Chromo domain-like [54160] (4 families) (S)
    SH3-like barrel is capped by a C-terminal helix
  5. Family b.34.13.2: Chromo domain [54165] (8 proteins)
    lacks the SH3-like barrel first strand that can be complemented by bound peptide ligand; in shadow chromo domain the corresponding site is altered by insertion; similarity to the IL8-like fold
  6. Protein Chromodomain protein, Y-like isoform [141218] (1 species)
  7. Species Human (Homo sapiens) [TaxId:9606] [141219] (1 PDB entry)
    Uniprot Q32NC5 1-66
  8. Domain d2dnta1: 2dnt A:8-72 [131593]
    Other proteins in same PDB: d2dnta2, d2dnta3

Details for d2dnta1

PDB Entry: 2dnt (more details)

PDB Description: Solution Structure of RSGI RUH-064, a Chromo Domain from Human cDNA
PDB Compounds: (A:) Chromodomain protein, Y chromosome-like, isoform b

SCOPe Domain Sequences for d2dnta1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2dnta1 b.34.13.2 (A:8-72) Chromodomain protein, Y-like isoform {Human (Homo sapiens) [TaxId: 9606]}
maseelyeverivdkrknkkgkteylvrwkgydseddtwepeqhlvnceeyihdfnrrht
ekqke

SCOPe Domain Coordinates for d2dnta1 are not available.

Timeline for d2dnta1:

Domains from same chain:
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d2dnta2, d2dnta3