SCOPe 2.08: Domain d2ddsd_: 2dds D:

Lineage for d2ddsd_ (2dds D:)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.151: DNase I-like [56218] (1 superfamily)
   contains beta-sandwich; duplication of alpha+beta motif

4. Superfamily d.151.1: DNase I-like [56219] (4 families)

5. Family d.151.1.3: Sphingomyelin phosphodiesterase-like [143902] (2 proteins)
   part of Pfam PF03372

6. Protein automated matches [190598] (1 species)
   not a true protein

7. Species Bacillus cereus [TaxId:1396] [187614] (4 PDB entries)

8. Domain d2ddsd_: 2dds D: [131405]
   automated match to d2ddra1
   complexed with co

Details for d2ddsd_

PDB Entry: 2dds, 1.8 Å

PDB Description: Crystal structure of sphingomyelinase from Bacillus cereus with cobalt ion

PDB Compounds: (D:) Sphingomyelin phosphodiesterase

SCOPe Domain Sequences for d2ddsd_:

Sequence, based on SEQRES records:

>d2ddsd_ d.151.1.3 (D:) automated matches {Bacillus cereus [TaxId: 1396]}
ndtlkvmthnvymlstnlypnwgqteradligaadyiknqdvvilnevfdnsasdrllgn
lkkeypnqtavlgrssgsewdktlgnyssstpedggvaivskwpiaekiqyvfakgcgpd
nlsnkgfvytkikkndrfvhvigthlqaedsmcgktspasvrtnqlkeiqdfiknknipn
neyvliggdmnvnkinaennndseyasmfktlnasvpsytghtatwdattnsiakynfpd
spaeyldyiiaskdhanpsyienkvlqpkspqwtvtswfqkytyndysdhypveatism

Sequence, based on observed residues (ATOM records):

>d2ddsd_ d.151.1.3 (D:) automated matches {Bacillus cereus [TaxId: 1396]}
ndtlkvmthnvymlstnlypnwgqteradligaadyiknqdvvilnevfdnsasdrllgn
lkkeypnqtavlgrssgsewdktlgnyssstpedggvaivskwpiaekiqyvfakgcnls
nkgfvytkikkndrfvhvigthlqaedsspasvrtnqlkeiqdfiknknipnneyvligg
dmnvnkinaennndseyasmfktlnasvpsytghtatwdattnsiakynfpdspaeyldy
iiaskdhanpsyienkvlqpkspqwtvtswfqkytyndysdhypveatism

Timeline for d2ddsd_:

• d2ddsd_ first appeared in SCOP 1.73, called d2ddsd1
  
• d2ddsd_ appears in SCOPe 2.07