SCOPe 2.07: Domain d2ddrb_: 2ddr B:

Lineage for d2ddrb_ (2ddr B:)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.151: DNase I-like [56218] (1 superfamily)
   contains beta-sandwich; duplication of alpha+beta motif

4. Superfamily d.151.1: DNase I-like [56219] (4 families)

5. Family d.151.1.3: Sphingomyelin phosphodiesterase-like [143902] (2 proteins)
   part of Pfam PF03372

6. Protein automated matches [190598] (1 species)
   not a true protein

7. Species Bacillus cereus [TaxId:1396] [187614] (4 PDB entries)

8. Domain d2ddrb_: 2ddr B: [131399]
   Other proteins in same PDB: d2ddra1
   automated match to d2ddra1
   complexed with ca

Details for d2ddrb_

PDB Entry: 2ddr, 1.4 Å

PDB Description: Crystal structure of sphingomyelinase from Bacillus cereus with calcium ion

PDB Compounds: (B:) Sphingomyelin phosphodiesterase

SCOPe Domain Sequences for d2ddrb_:

Sequence, based on SEQRES records:

>d2ddrb_ d.151.1.3 (B:) automated matches {Bacillus cereus [TaxId: 1396]}
ndtlkvmthnvymlstnlypnwgqteradligaadyiknqdvvilnevfdnsasdrllgn
lkkeypnqtavlgrssgsewdktlgnyssstpedggvaivskwpiaekiqyvfakgcgpd
nlsnkgfvytkikkndrfvhvigthlqaedsmcgktspasvrtnqlkeiqdfiknknipn
neyvliggdmnvnkinaennndseyasmfktlnasvpsytghtatwdattnsiakynfpd
spaeyldyiiaskdhanpsyienkvlqpkspqwtvtswfqkytyndysdhypveatism

Sequence, based on observed residues (ATOM records):

>d2ddrb_ d.151.1.3 (B:) automated matches {Bacillus cereus [TaxId: 1396]}
ndtlkvmthnvymlstnlypnwgqteradligaadyiknqdvvilnevfdnsasdrllgn
lkkeypnqtavlgrssgsewdktlgnyssstpedggvaivskwpiaekiqyvfakgcnls
nkgfvytkikkndrfvhvigthlqaespasvrtnqlkeiqdfiknknipnneyvliggdm
nvnkinaennndseyasmfktlnasvpsytghtatwdattnsiakynfpdspaeyldyii
askdhanpsyienkvlqpkspqwtvtswfqkytyndysdhypveatism

Timeline for d2ddrb_:

• d2ddrb_ first appeared in SCOP 1.73, called d2ddrb1
  
• d2ddrb_ appears in SCOPe 2.06
  
• d2ddrb_ appears in the current release, SCOPe 2.08