SCOP 1.73: Domain d2ddrb1: 2ddr B:7-305

Lineage for d2ddrb1 (2ddr B:7-305)

1. Root: SCOP 1.73

2. Class d: Alpha and beta proteins (a+b) [53931] (334 folds)

3. Fold d.151: DNase I-like [56218] (1 superfamily)
   contains beta-sandwich; duplication of alpha+beta motif

4. Superfamily d.151.1: DNase I-like [56219] (3 families)

5. Family d.151.1.3: Sphingomyelin phosphodiesterase-like [143902] (1 protein)
   part of Pfam PF03372

6. Protein Sphingomyelin phosphodiesterase C [143903] (2 species)

7. Species Bacillus cereus [TaxId:1396] [143904] (3 PDB entries)

8. Domain d2ddrb1: 2ddr B:7-305 [131399]
   automatically matched to 2DDR A:7-305
   complexed with ca

Details for d2ddrb1

PDB Entry: 2ddr, 1.4 Å

PDB Description: Crystal structure of sphingomyelinase from Bacillus cereus with calcium ion

PDB Compounds: (B:) Sphingomyelin phosphodiesterase

SCOP Domain Sequences for d2ddrb1:

Sequence, based on SEQRES records:

>d2ddrb1 d.151.1.3 (B:7-305) Sphingomyelin phosphodiesterase C {Bacillus cereus [TaxId: 1396]}
ndtlkvmthnvymlstnlypnwgqteradligaadyiknqdvvilnevfdnsasdrllgn
lkkeypnqtavlgrssgsewdktlgnyssstpedggvaivskwpiaekiqyvfakgcgpd
nlsnkgfvytkikkndrfvhvigthlqaedsmcgktspasvrtnqlkeiqdfiknknipn
neyvliggdmnvnkinaennndseyasmfktlnasvpsytghtatwdattnsiakynfpd
spaeyldyiiaskdhanpsyienkvlqpkspqwtvtswfqkytyndysdhypveatism

Sequence, based on observed residues (ATOM records):

>d2ddrb1 d.151.1.3 (B:7-305) Sphingomyelin phosphodiesterase C {Bacillus cereus [TaxId: 1396]}
ndtlkvmthnvymlstnlypnwgqteradligaadyiknqdvvilnevfdnsasdrllgn
lkkeypnqtavlgrssgsewdktlgnyssstpedggvaivskwpiaekiqyvfakgcnls
nkgfvytkikkndrfvhvigthlqaespasvrtnqlkeiqdfiknknipnneyvliggdm
nvnkinaennndseyasmfktlnasvpsytghtatwdattnsiakynfpdspaeyldyii
askdhanpsyienkvlqpkspqwtvtswfqkytyndysdhypveatism

Timeline for d2ddrb1:

• d2ddrb1 is new in SCOP 1.73
  
• d2ddrb1 appears in SCOP 1.75
  
• d2ddrb1 appears in the current release, SCOPe 2.08, called d2ddrb_