SCOPe 2.07: Domain d2ddra1: 2ddr A:7-305

Lineage for d2ddra1 (2ddr A:7-305)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.151: DNase I-like [56218] (1 superfamily)
   contains beta-sandwich; duplication of alpha+beta motif

4. Superfamily d.151.1: DNase I-like [56219] (4 families)

5. Family d.151.1.3: Sphingomyelin phosphodiesterase-like [143902] (2 proteins)
   part of Pfam PF03372

6. Protein Sphingomyelin phosphodiesterase C [143903] (2 species)

7. Species Bacillus cereus [TaxId:1396] [143904] (1 PDB entry)
   Uniprot P11889 34-332

8. Domain d2ddra1: 2ddr A:7-305 [131398]
   Other proteins in same PDB: d2ddrb_, d2ddrc_, d2ddrd_
   complexed with ca

Details for d2ddra1

PDB Entry: 2ddr, 1.4 Å

PDB Description: Crystal structure of sphingomyelinase from Bacillus cereus with calcium ion

PDB Compounds: (A:) Sphingomyelin phosphodiesterase

SCOPe Domain Sequences for d2ddra1:

Sequence, based on SEQRES records:

>d2ddra1 d.151.1.3 (A:7-305) Sphingomyelin phosphodiesterase C {Bacillus cereus [TaxId: 1396]}
ndtlkvmthnvymlstnlypnwgqteradligaadyiknqdvvilnevfdnsasdrllgn
lkkeypnqtavlgrssgsewdktlgnyssstpedggvaivskwpiaekiqyvfakgcgpd
nlsnkgfvytkikkndrfvhvigthlqaedsmcgktspasvrtnqlkeiqdfiknknipn
neyvliggdmnvnkinaennndseyasmfktlnasvpsytghtatwdattnsiakynfpd
spaeyldyiiaskdhanpsyienkvlqpkspqwtvtswfqkytyndysdhypveatism

Sequence, based on observed residues (ATOM records):

>d2ddra1 d.151.1.3 (A:7-305) Sphingomyelin phosphodiesterase C {Bacillus cereus [TaxId: 1396]}
ndtlkvmthnvymlstnlypnwgqteradligaadyiknqdvvilnevfdnsasdrllgn
lkkeypnqtavlgrssgsewdktlgnyssstpedggvaivskwpiaekiqyvfakgclsn
kgfvytkikkndrfvhvigthlqaespasvrtnqlkeiqdfiknknipnneyvliggdmn
vnkinaennndseyasmfktlnasvpsytghtatwdattnsiakynfpdspaeyldyiia
skdhanpsyienkvlqpkspqwtvtswfqkytyndysdhypveatism

Timeline for d2ddra1:

• d2ddra1 first appeared in SCOP 1.73
  
• d2ddra1 appears in SCOPe 2.06
  
• d2ddra1 appears in the current release, SCOPe 2.08