Lineage for d2ddra1 (2ddr A:7-305)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2548549Fold d.151: DNase I-like [56218] (1 superfamily)
    contains beta-sandwich; duplication of alpha+beta motif
  4. 2548550Superfamily d.151.1: DNase I-like [56219] (4 families) (S)
  5. 2548643Family d.151.1.3: Sphingomyelin phosphodiesterase-like [143902] (2 proteins)
    part of Pfam PF03372
  6. 2548644Protein Sphingomyelin phosphodiesterase C [143903] (2 species)
  7. 2548645Species Bacillus cereus [TaxId:1396] [143904] (1 PDB entry)
    Uniprot P11889 34-332
  8. 2548646Domain d2ddra1: 2ddr A:7-305 [131398]
    Other proteins in same PDB: d2ddrb_, d2ddrc_, d2ddrd_
    complexed with ca

Details for d2ddra1

PDB Entry: 2ddr (more details), 1.4 Å

PDB Description: Crystal structure of sphingomyelinase from Bacillus cereus with calcium ion
PDB Compounds: (A:) Sphingomyelin phosphodiesterase

SCOPe Domain Sequences for d2ddra1:

Sequence, based on SEQRES records: (download)

>d2ddra1 d.151.1.3 (A:7-305) Sphingomyelin phosphodiesterase C {Bacillus cereus [TaxId: 1396]}
ndtlkvmthnvymlstnlypnwgqteradligaadyiknqdvvilnevfdnsasdrllgn
lkkeypnqtavlgrssgsewdktlgnyssstpedggvaivskwpiaekiqyvfakgcgpd
nlsnkgfvytkikkndrfvhvigthlqaedsmcgktspasvrtnqlkeiqdfiknknipn
neyvliggdmnvnkinaennndseyasmfktlnasvpsytghtatwdattnsiakynfpd
spaeyldyiiaskdhanpsyienkvlqpkspqwtvtswfqkytyndysdhypveatism

Sequence, based on observed residues (ATOM records): (download)

>d2ddra1 d.151.1.3 (A:7-305) Sphingomyelin phosphodiesterase C {Bacillus cereus [TaxId: 1396]}
ndtlkvmthnvymlstnlypnwgqteradligaadyiknqdvvilnevfdnsasdrllgn
lkkeypnqtavlgrssgsewdktlgnyssstpedggvaivskwpiaekiqyvfakgclsn
kgfvytkikkndrfvhvigthlqaespasvrtnqlkeiqdfiknknipnneyvliggdmn
vnkinaennndseyasmfktlnasvpsytghtatwdattnsiakynfpdspaeyldyiia
skdhanpsyienkvlqpkspqwtvtswfqkytyndysdhypveatism

SCOPe Domain Coordinates for d2ddra1:

Click to download the PDB-style file with coordinates for d2ddra1.
(The format of our PDB-style files is described here.)

Timeline for d2ddra1: