SCOPe 2.07: Domain d2dc9a_: 2dc9 A:

Lineage for d2dc9a_ (2dc9 A:)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.3: Cysteine proteinases [54000] (1 superfamily)
   consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn

4. Superfamily d.3.1: Cysteine proteinases [54001] (24 families)
   the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet

5. Family d.3.1.1: Papain-like [54002] (26 proteins)

6. Protein automated matches [190264] (12 species)
   not a true protein

7. Species Cow (Bos taurus) [TaxId:9913] [187053] (8 PDB entries)

8. Domain d2dc9a_: 2dc9 A: [131368]
   automated match to d1itoa_
   complexed with 74m, gol, po4

Details for d2dc9a_

PDB Entry: 2dc9, 1.94 Å

PDB Description: x-ray crystal structure analysis of bovine spleen cathepsin b-ca074me complex

PDB Compounds: (A:) cathepsin b

SCOPe Domain Sequences for d2dc9a_:

Sequence, based on SEQRES records:

>d2dc9a_ d.3.1.1 (A:) automated matches {Cow (Bos taurus) [TaxId: 9913]}
lpesfdareqwpncptikeirdqgscgscwafgaveaisdricihsngrvnvevsaedml
tccggecgdgcnggfpsgawnfwtkkglvsgglynshvgcrpysippcehhvngsrppct
gegdtpkcsktcepgyspsykedkhfgcssysvannekeimaeiykngpvegafsvysdf
llyksgvyqhvsgeimgghairilgwgvengtpywlvgnswntdwgdngffkilrgqdhc
gieseivagmpct

Sequence, based on observed residues (ATOM records):

>d2dc9a_ d.3.1.1 (A:) automated matches {Cow (Bos taurus) [TaxId: 9913]}
lpesfdareqwpncptikeirdqgscgscwafgaveaisdricihsnvnvevsaedmltc
cggecgdgcnggfpsgawnfwtkkglvsgglynshvgcrpysippcehhvngsrppctge
gdtpkcsktcepgyspsykedkhfgcssysvannekeimaeiykngpvegafsvysdfll
yksgvyqhvsgeimgghairilgwgvengtpywlvgnswntdwgdngffkilrgqdhcgi
eseivagmpct

Timeline for d2dc9a_:

• d2dc9a_ first appeared in SCOP 1.73, called d2dc9a1
  
• d2dc9a_ appears in SCOPe 2.06
  
• d2dc9a_ appears in the current release, SCOPe 2.08