Lineage for d2d5nd2 (2d5n D:1-145)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2918481Fold c.97: Cytidine deaminase-like [53926] (2 superfamilies)
    core: alpha-beta(2)-(alpha-beta)2; 3 layers (a/b/a); mixed beta-sheet of 4 strands, order 2134; strand 1 is antiparallel to the rest
  4. 2918482Superfamily c.97.1: Cytidine deaminase-like [53927] (7 families) (S)
    contains extra C-terminal strand 5, order 21345
  5. 2918566Family c.97.1.2: Deoxycytidylate deaminase-like [89800] (8 proteins)
    strand 5 is parallel to strand 4
  6. 2918623Protein Riboflavin biosynthesis protein RibD [142837] (2 species)
  7. 2918624Species Bacillus subtilis [TaxId:1423] [142838] (4 PDB entries)
    Uniprot P17618 1-145
  8. 2918636Domain d2d5nd2: 2d5n D:1-145 [131280]
    Other proteins in same PDB: d2d5na1, d2d5nb1, d2d5nc1, d2d5nd1, d2d5nd3
    automated match to d2b3za2
    complexed with ndp, zn

Details for d2d5nd2

PDB Entry: 2d5n (more details), 2.97 Å

PDB Description: Crystal structure of a bifunctional deaminase and reductase involved in riboflavin biosynthesis
PDB Compounds: (D:) Riboflavin biosynthesis protein ribD

SCOPe Domain Sequences for d2d5nd2:

Sequence; same for both SEQRES and ATOM records: (download)

>d2d5nd2 c.97.1.2 (D:1-145) Riboflavin biosynthesis protein RibD {Bacillus subtilis [TaxId: 1423]}

SCOPe Domain Coordinates for d2d5nd2:

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Timeline for d2d5nd2: