Lineage for d2d3qb1 (2d3q B:4-442)

  1. Root: SCOP 1.73
  2. 713694Class d: Alpha and beta proteins (a+b) [53931] (334 folds)
  3. 723373Fold d.58: Ferredoxin-like [54861] (55 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 723747Superfamily d.58.4: Dimeric alpha+beta barrel [54909] (17 families) (S)
    dimerizes through the beta-sheet; forms beta-sheet barrel, closed (n=8, S=12); dimers may assemble in higher oligomers
  5. 723937Family d.58.4.14: Dyp-type peroxidase-like [143265] (3 proteins)
    Pfam PF04261
  6. 723938Protein Decolorizing peroxidase DyP [143268] (1 species)
  7. 723939Species Geotrichum candidum [TaxId:27317] [143269] (1 PDB entry)
    species assignment from the UniProt sequence (Id 100%); 2d3q species is Thanatephorus cucumeris
  8. 723941Domain d2d3qb1: 2d3q B:4-442 [131215]
    automatically matched to 2D3Q A:4-442
    complexed with hem

Details for d2d3qb1

PDB Entry: 2d3q (more details), 2.8 Å

PDB Description: Crystal Structure of a Decolorizing Peroxidase (DyP) That Catalyses the Biological Oxidation of Anthraquinone Derivatives
PDB Compounds: (B:) Decolorizing Peroxidase

SCOP Domain Sequences for d2d3qb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2d3qb1 d.58.4.14 (B:4-442) Decolorizing peroxidase DyP {Geotrichum candidum [TaxId: 27317]}
tilplnniqgdilvgmkkqkerfvffqvndatsfktalktyvperitsaailisdpsqqp
lafvnlgfsntglqalgitddlgdaqfpdgqfadaanlgddlsqwvapftgttihgvfli
gsdqddfldqftddisstfgssitqvqalsgsarpgdqaghehfgfldgisqpsvtgwet
tvfpgqavvppgiiltgrdgdtgtrpswaldgsfmafrhfqqkvpefnaytlanaipans
agnltqqegaeflgarmfgrwksgapidlaptaddpalgadpqrnnnfdysdtltdetrc
pfgahvrktnprqdlggpvdtfhamrssipygpetsdaelasgvtaqdrgllfveyqsii
gngfrfqqinwannanfpfskpitpgiepiigqttprtvggldplnqnetftvplfvipk
ggeyfflpsisaltatiaa

SCOP Domain Coordinates for d2d3qb1:

Click to download the PDB-style file with coordinates for d2d3qb1.
(The format of our PDB-style files is described here.)

Timeline for d2d3qb1: